This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1nv0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1nv0.gif|left|200px]]
[[Image:1nv0.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1nv0 |SIZE=350|CAPTION= <scene name='initialview01'>1nv0</scene>, resolution 1.8&Aring;
+
The line below this paragraph, containing "STRUCTURE_1nv0", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=F6P:FRUCTOSE-6-PHOSPHATE'>F6P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TL:THALLIUM+(I)+ION'>TL</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-bisphosphatase Fructose-bisphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.11 3.1.3.11] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1nv0| PDB=1nv0 | SCENE= }}
-
|RELATEDENTRY=[[1nuz|1NUZ]], [[1nv1|1NV1]], [[1nv2|1NV2]], [[1nv3|1NV3]], [[1nv4|1NV4]], [[1nv5|1NV5]], [[1nv6|1NV6]], [[1nv7|1NV7]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1nv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nv0 OCA], [http://www.ebi.ac.uk/pdbsum/1nv0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1nv0 RCSB]</span>
+
-
}}
+
'''Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6-Phosphate, Phosphate and 1 mM Thallium'''
'''Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6-Phosphate, Phosphate and 1 mM Thallium'''
Line 30: Line 27:
[[Category: Honzatko, R B.]]
[[Category: Honzatko, R B.]]
[[Category: Iancu, C V.]]
[[Category: Iancu, C V.]]
-
[[Category: allosteric enzyme]]
+
[[Category: Allosteric enzyme]]
-
[[Category: bisphosphatase]]
+
[[Category: Bisphosphatase]]
-
[[Category: gluconeogenesis]]
+
[[Category: Gluconeogenesis]]
-
[[Category: hydrolase]]
+
[[Category: Hydrolase]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 03:00:48 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:35:54 2008''
+

Revision as of 00:00, 3 May 2008

Template:STRUCTURE 1nv0

Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6-Phosphate, Phosphate and 1 mM Thallium


Overview

Fructose-1,6-bisphosphatase requires divalent cations (Mg2+, Mn2+, or Zn2+) for catalysis, but a diverse set of monovalent cations (K+, Tl+, Rb+, or NH(4)(+)) will further enhance enzyme activity. Here, the interaction of Tl+ with fructose-1,6-bisphosphatase is explored under conditions that support catalysis. On the basis of initial velocity kinetics, Tl+ enhances catalysis by 20% with a K(a) of 1.3 mm and a Hill coefficient near unity. Crystal structures of enzyme complexes with Mg2+, Tl+, and reaction products, in which the concentration of Tl+ is 1 mm or less, reveal Mg2+ at metal sites 1, 2, and 3 of the active site, but little or no bound Tl+. Intermediate concentrations of Tl+ (5-20 mm) displace Mg2+ from site 3 and the 1-OH group of fructose 6-phosphate from in-line geometry with respect to bound orthophosphate. Loop 52-72 appears in a new conformational state, differing from its engaged conformation by disorder in residues 61-69. Tl+ does not bind to metal sites 1 or 2 in the presence of Mg2+, but does bind to four other sites with partial occupancy. Two of four Tl+ sites probably represent alternative binding sites for the site 3 catalytic Mg2+, whereas the other sites could play roles in monovalent cation activation.

About this Structure

1NV0 is a Single protein structure of sequence from Sus scrofa. Full crystallographic information is available from OCA.

Reference

Interaction of Tl+ with product complexes of fructose-1,6-bisphosphatase., Choe JY, Nelson SW, Fromm HJ, Honzatko RB, J Biol Chem. 2003 May 2;278(18):16008-14. Epub 2003 Feb 20. PMID:12595529 Page seeded by OCA on Sat May 3 03:00:48 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools