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| ==Structure of a serine protease MycP1, an essential component of the type VII (ESX-1) secretion system== | | ==Structure of a serine protease MycP1, an essential component of the type VII (ESX-1) secretion system== |
- | <StructureSection load='4hvl' size='340' side='right' caption='[[4hvl]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='4hvl' size='340' side='right'caption='[[4hvl]], [[Resolution|resolution]] 2.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4hvl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_thermoresistibile_atcc_19527 Mycobacterium thermoresistibile atcc 19527]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HVL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HVL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4hvl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_thermoresistibile_ATCC_19527 Mycolicibacterium thermoresistibile ATCC 19527]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HVL FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KEK_05522, MycP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1078020 Mycobacterium thermoresistibile ATCC 19527])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hvl OCA], [https://pdbe.org/4hvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hvl RCSB], [https://www.ebi.ac.uk/pdbsum/4hvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hvl ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hvl OCA], [http://pdbe.org/4hvl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hvl RCSB], [http://www.ebi.ac.uk/pdbsum/4hvl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hvl ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/G7CDQ2_MYCT3 G7CDQ2_MYCT3] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Mycobacterium thermoresistibile atcc 19527]] | + | [[Category: Large Structures]] |
- | [[Category: Evans, T J]] | + | [[Category: Mycolicibacterium thermoresistibile ATCC 19527]] |
- | [[Category: Korotkov, K V]] | + | [[Category: Evans TJ]] |
- | [[Category: Cell wall]] | + | [[Category: Korotkov KV]] |
- | [[Category: Membrane protein]]
| + | |
- | [[Category: Mycosin]]
| + | |
- | [[Category: Protease]]
| + | |
- | [[Category: Protein secretion]]
| + | |
- | [[Category: Rv3883c]]
| + | |
- | [[Category: Serine protease]]
| + | |
- | [[Category: Subtilisin]]
| + | |
- | [[Category: Subtilisin fold]]
| + | |
| Structural highlights
Function
G7CDQ2_MYCT3
Publication Abstract from PubMed
Mycobacteria use specialized ESX secretion systems to transport proteins across their cell membranes in order to manipulate their environment. In pathogenic Mycobacterium tuberculosis there are five paralogous ESX secretion systems, named ESX-1 through ESX-5. Each system includes a subtilisin-like protease (mycosin or MycP) as a core component essential for secretion. Here we report crystal structures of MycP1 and MycP3, the mycosins expressed by the ESX-1 and ESX-3 systems, respectively. In both mycosins the putative propeptide wraps around the catalytic domain and does not occlude the active site. The extensive contacts between the putative propeptide and catalytic domain, which include a disulfide bond, suggest that the N-terminal extension is an integral part of the active mycosin. The catalytic residues of MycP1 and MycP3 are located in a deep active site groove in contrast with an exposed active site in majority of subtilisins. We show that MycP1 specifically cleaves ESX-1 secretion-associated protein B (EspB) in vitro at residues Ala358 and Ala386. We also systematically characterize the specificity of MycP1 using peptide libraries, and show that it has evolved a narrow specificity relative to other subtilisins. Finally, comparison of the MycP1 and MycP3 structures suggest that both enzymes have stringent and different specificity profiles that result from the structurally distinct active site pockets, which could explain the system specific functioning of these proteases.
Understanding specificity of the mycosin proteases in ESX/type VII secretion by structural and functional analysis.,Wagner JM, Evans TJ, Chen J, Zhu H, Houben EN, Bitter W, Korotkov KV J Struct Biol. 2013 Oct 7. pii: S1047-8477(13)00263-3. doi:, 10.1016/j.jsb.2013.09.022. PMID:24113528[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Wagner JM, Evans TJ, Chen J, Zhu H, Houben EN, Bitter W, Korotkov KV. Understanding specificity of the mycosin proteases in ESX/type VII secretion by structural and functional analysis. J Struct Biol. 2013 Oct 7. pii: S1047-8477(13)00263-3. doi:, 10.1016/j.jsb.2013.09.022. PMID:24113528 doi:http://dx.doi.org/10.1016/j.jsb.2013.09.022
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