This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3vcn
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of mannonate dehydratase (target EFI-502209) from Caulobacter crescentus CB15== | ==Crystal structure of mannonate dehydratase (target EFI-502209) from Caulobacter crescentus CB15== | ||
| - | <StructureSection load='3vcn' size='340' side='right' caption='[[3vcn]], [[Resolution|resolution]] 1.45Å' scene=''> | + | <StructureSection load='3vcn' size='340' side='right'caption='[[3vcn]], [[Resolution|resolution]] 1.45Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3vcn]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3vcn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_15252_[[caulobacter_crescentus_poindexter_1964]] Atcc 15252 [[caulobacter crescentus poindexter 1964]]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VCN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VCN FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CC_0532, PRK15072 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CC_0532, PRK15072 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 ATCC 15252 [[Caulobacter crescentus Poindexter 1964]]])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vcn OCA], [https://pdbe.org/3vcn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vcn RCSB], [https://www.ebi.ac.uk/pdbsum/3vcn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vcn ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/MAND2_CAUCR MAND2_CAUCR]] Catalyzes the dehydration of D-mannonate. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref> |
| + | |||
| + | ==See Also== | ||
| + | *[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
[[Category: Bhosle, R]] | [[Category: Bhosle, R]] | ||
| Line 35: | Line 38: | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
[[Category: Magnesium binding site]] | [[Category: Magnesium binding site]] | ||
| + | [[Category: Structural genomic]] | ||
Revision as of 18:38, 27 July 2022
Crystal structure of mannonate dehydratase (target EFI-502209) from Caulobacter crescentus CB15
| |||||||||||
Categories: Large Structures | Almo, S C | Bhosle, R | Chowdhury, S | EFI, Enzyme Function Initiative | Evans, B | Gerlt, J A | Glenn, A Scott | Hammonds, J | Hillerich, B | Imker, H J | Patskovsky, Y | Seidel, R D | Toro, R | Washington, E | Zencheck, W D | Efi | Enolase | Enzyme function initiative | Lyase | Magnesium binding site | Structural genomic
