This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4e2x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==X-ray Structure of the Y222F mutant of TcaB9, a C-3'-Methyltransferase, in Complex with S-Adenosyl-L-Homocysteine and dTDP==
==X-ray Structure of the Y222F mutant of TcaB9, a C-3'-Methyltransferase, in Complex with S-Adenosyl-L-Homocysteine and dTDP==
-
<StructureSection load='4e2x' size='340' side='right' caption='[[4e2x]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='4e2x' size='340' side='right'caption='[[4e2x]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4e2x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micromonospora_chalcease"_(sic)_(foulerton_1905)_orskov_1923 "micromonospora chalcease" (sic) (foulerton 1905) orskov 1923]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E2X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4E2X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4e2x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Micromonospora_chalcea Micromonospora chalcea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E2X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4E2X FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=TYD:THYMIDINE-5-DIPHOSPHATE'>TYD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=TYD:THYMIDINE-5-DIPHOSPHATE'>TYD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4e2w|4e2w]], [[4e2y|4e2y]], [[4e2z|4e2z]], [[4e30|4e30]], [[4e31|4e31]], [[4e32|4e32]], [[4e33|4e33]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4e2x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e2x OCA], [https://pdbe.org/4e2x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4e2x RCSB], [https://www.ebi.ac.uk/pdbsum/4e2x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4e2x ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcab9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1874 "Micromonospora chalcease" (sic) (Foulerton 1905) Orskov 1923])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4e2x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e2x OCA], [http://pdbe.org/4e2x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4e2x RCSB], [http://www.ebi.ac.uk/pdbsum/4e2x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4e2x ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/B5L6K6_MICCH B5L6K6_MICCH]]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bruender, N A]]
+
[[Category: Large Structures]]
-
[[Category: Holden, H M]]
+
[[Category: Micromonospora chalcea]]
-
[[Category: Kijanose]]
+
[[Category: Bruender NA]]
-
[[Category: Sugar methylation]]
+
[[Category: Holden HM]]
-
[[Category: Tetradeoxy sugar]]
+
-
[[Category: Tetronitrose]]
+
-
[[Category: Transferase]]
+

Revision as of 06:46, 28 September 2022

X-ray Structure of the Y222F mutant of TcaB9, a C-3'-Methyltransferase, in Complex with S-Adenosyl-L-Homocysteine and dTDP

PDB ID 4e2x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools