3me5

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Current revision (10:10, 6 November 2024) (edit) (undo)
 
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==Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T==
==Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T==
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<StructureSection load='3me5' size='340' side='right' caption='[[3me5]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
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<StructureSection load='3me5' size='340' side='right'caption='[[3me5]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3me5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457t Shigella flexneri 2a str. 2457t]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ME5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ME5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3me5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ME5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ME5 FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lx6|3lx6]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AAP17376.1, dcm, S2100, SF2005, SF2457T_1495 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198215 Shigella flexneri 2a str. 2457T])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3me5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3me5 OCA], [https://pdbe.org/3me5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3me5 RCSB], [https://www.ebi.ac.uk/pdbsum/3me5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3me5 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_(cytosine-5-)-methyltransferase DNA (cytosine-5-)-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.37 2.1.1.37] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3me5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3me5 OCA], [http://pdbe.org/3me5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3me5 RCSB], [http://www.ebi.ac.uk/pdbsum/3me5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3me5 ProSAT]</span></td></tr>
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</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/me/3me5_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/me/3me5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Shigella flexneri 2a str. 2457t]]
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[[Category: Large Structures]]
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[[Category: Almo, S C]]
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[[Category: Shigella flexneri 2a str. 2457T]]
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[[Category: Burley, S K]]
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[[Category: Almo SC]]
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[[Category: Malashkevich, V N]]
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[[Category: Burley SK]]
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[[Category: Structural genomic]]
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[[Category: Malashkevich VN]]
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[[Category: Ramagopal, U A]]
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[[Category: Ramagopal UA]]
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[[Category: Sauder, J M]]
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[[Category: Sauder JM]]
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[[Category: Toro, R]]
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[[Category: Toro R]]
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[[Category: Cytosine methylase]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Transferase]]
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Current revision

Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T

PDB ID 3me5

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