This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ggo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GalNac-beta1,3-GlcNAc-beta-pNP==
==Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GalNac-beta1,3-GlcNAc-beta-pNP==
-
<StructureSection load='5ggo' size='340' side='right' caption='[[5ggo]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='5ggo' size='340' side='right'caption='[[5ggo]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ggo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GGO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ggo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GGO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5GGO FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LEC:N-[(2S,3R,4R,5S,6R)-4,5-DIHYDROXY-6-(HYDROXYMETHYL)-2-(4-NITROPHENOXY)OXAN-3-YL]ETHANAMIDE'>LEC</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LEC:N-[(2S,3R,4R,5S,6R)-4,5-DIHYDROXY-6-(HYDROXYMETHYL)-2-(4-NITROPHENOXY)OXAN-3-YL]ETHANAMIDE'>LEC</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ggf|5ggf]], [[5ggg|5ggg]], [[5ggi|5ggi]], [[5ggj|5ggj]], [[5ggk|5ggk]], [[5ggl|5ggl]], [[5ggn|5ggn]], [[5ggp|5ggp]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ggf|5ggf]], [[5ggg|5ggg]], [[5ggi|5ggi]], [[5ggj|5ggj]], [[5ggk|5ggk]], [[5ggl|5ggl]], [[5ggn|5ggn]], [[5ggp|5ggp]]</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ggo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ggo OCA], [http://pdbe.org/5ggo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ggo RCSB], [http://www.ebi.ac.uk/pdbsum/5ggo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ggo ProSAT]</span></td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">POMGNT1, MGAT1.2, UNQ746/PRO1475 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ggo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ggo OCA], [http://pdbe.org/5ggo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ggo RCSB], [http://www.ebi.ac.uk/pdbsum/5ggo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ggo ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Human]]
 +
[[Category: Large Structures]]
[[Category: Kato, R]]
[[Category: Kato, R]]
[[Category: Kuwabara, N]]
[[Category: Kuwabara, N]]

Revision as of 06:42, 13 May 2020

Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GalNac-beta1,3-GlcNAc-beta-pNP

PDB ID 5ggo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools