5kp0

From Proteopedia

(Difference between revisions)

Revision as of 06:30, 5 August 2020

Recognition and targeting mechanisms by chaperones in flagella assembly and operation

Structural highlights

5kp0 is a 1 chain structure with sequence from Salty. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:	fliT, STM1962, fliI, fla AIII, flaC, STM1972 (SALTY)
Activity:	H(+)-transporting two-sector ATPase, with EC number 3.6.3.14
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[FLIT_SALTY] Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.^[1] ^[2] ^[3] ^[4]

Publication Abstract from PubMed

The flagellum is a complex bacterial nanomachine that requires the proper assembly of several different proteins for its function. Dedicated chaperones are central in preventing aggregation or undesired interactions of flagellar proteins, including their targeting to the export gate. FliT is a key flagellar chaperone that binds to several flagellar proteins in the cytoplasm, including its cognate filament-capping protein FliD. We have determined the solution structure of the FliT chaperone in the free state and in complex with FliD and the flagellar ATPase FliI. FliT adopts a four-helix bundle and uses a hydrophobic surface formed by the first three helices to recognize its substrate proteins. We show that the fourth helix constitutes the binding site for FlhA, a membrane protein at the export gate. In the absence of a substrate protein FliT adopts an autoinhibited structure wherein both the binding sites for substrates and FlhA are occluded. Substrate binding to FliT activates the complex for FlhA binding and thus targeting of the chaperone-substrate complex to the export gate. The activation and targeting mechanisms reported for FliT appear to be shared among the other flagellar chaperones.

Recognition and targeting mechanisms by chaperones in flagellum assembly and operation.,Khanra N, Rossi P, Economou A, Kalodimos CG Proc Natl Acad Sci U S A. 2016 Aug 30;113(35):9798-803. doi:, 10.1073/pnas.1607845113. Epub 2016 Aug 15. PMID:27528687^[5]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Fraser GM, Bennett JC, Hughes C. Substrate-specific binding of hook-associated proteins by FlgN and FliT, putative chaperones for flagellum assembly. Mol Microbiol. 1999 May;32(3):569-80. PMID:10320579
↑ Kutsukake K, Ikebe T, Yamamoto S. Two novel regulatory genes, fliT and fliZ, in the flagellar regulon of Salmonella. Genes Genet Syst. 1999 Dec;74(6):287-92. PMID:10791024
↑ Bennett JC, Thomas J, Fraser GM, Hughes C. Substrate complexes and domain organization of the Salmonella flagellar export chaperones FlgN and FliT. Mol Microbiol. 2001 Feb;39(3):781-91. PMID:11169117
↑ Yamamoto S, Kutsukake K. FliT acts as an anti-FlhD2C2 factor in the transcriptional control of the flagellar regulon in Salmonella enterica serovar typhimurium. J Bacteriol. 2006 Sep;188(18):6703-8. PMID:16952964 doi:http://dx.doi.org/10.1128/JB.00799-06
↑ Khanra N, Rossi P, Economou A, Kalodimos CG. Recognition and targeting mechanisms by chaperones in flagellum assembly and operation. Proc Natl Acad Sci U S A. 2016 Aug 30;113(35):9798-803. doi:, 10.1073/pnas.1607845113. Epub 2016 Aug 15. PMID:27528687 doi:http://dx.doi.org/10.1073/pnas.1607845113

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5kp0"

@@ Line 1: / Line 1: @@
 ==Recognition and targeting mechanisms by chaperones in flagella assembly and operation==
-<StructureSection load='5kp0' size='340' side='right' caption='[[5kp0]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='5kp0' size='340' side='right'caption='[[5kp0]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5kp0]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KP0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KP0 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5kp0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KP0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5KP0 FirstGlance]. <br>
-</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
+</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fliT, STM1962, fliI, fla AIII, flaC, STM1972 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kp0 OCA], [http://pdbe.org/5kp0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kp0 RCSB], [http://www.ebi.ac.uk/pdbsum/5kp0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kp0 ProSAT]</span></td></tr>
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5kp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kp0 OCA], [http://pdbe.org/5kp0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kp0 RCSB], [http://www.ebi.ac.uk/pdbsum/5kp0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kp0 ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 22: / Line 23: @@
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
+[[Category: Salty]]
 [[Category: Economou, A]]
 [[Category: Kalodimos, C G]]

5kp0

From Proteopedia

Revision as of 06:30, 5 August 2020

Recognition and targeting mechanisms by chaperones in flagella assembly and operation

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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