5szs
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Glycan shield and epitope masking of a coronavirus spike protein observed by cryo-electron microscopy== | |
- | + | <StructureSection load='5szs' size='340' side='right' caption='[[5szs]], [[Resolution|resolution]] 3.40Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[5szs]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5SZS FirstGlance]. <br> | |
- | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | |
- | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5szs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5szs OCA], [http://pdbe.org/5szs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5szs RCSB], [http://www.ebi.ac.uk/pdbsum/5szs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5szs ProSAT]</span></td></tr> |
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/SPIKE_CVHNL SPIKE_CVHNL]] S1 region attaches the virion to the cell membrane by interacting with human ACE2, initiating the infection. Binding to the receptor probably induces conformational changes in the S glycoprotein unmasking the fusion peptide of S2 region and activating membranes fusion. S2 region belongs to the class I viral fusion protein. Under the current model, the protein has at least 3 conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and target cell membrane fusion, the coiled coil regions (heptad repeats) regions assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and target cell membranes (By similarity). | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Bosch, B J]] | ||
+ | [[Category: DiMaio, F]] | ||
+ | [[Category: Frenz, B]] | ||
+ | [[Category: Li, W]] | ||
+ | [[Category: Rey, F A]] | ||
+ | [[Category: Snijder, J]] | ||
+ | [[Category: Tortorici, M A]] | ||
+ | [[Category: Veesler, D]] | ||
+ | [[Category: Walls, A C]] | ||
+ | [[Category: Coronavirus]] | ||
+ | [[Category: Nl63]] | ||
+ | [[Category: Vaccine]] | ||
+ | [[Category: Viral fusion protein]] | ||
+ | [[Category: Viral protein]] |
Revision as of 15:37, 14 September 2016
Glycan shield and epitope masking of a coronavirus spike protein observed by cryo-electron microscopy
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Categories: Bosch, B J | DiMaio, F | Frenz, B | Li, W | Rey, F A | Snijder, J | Tortorici, M A | Veesler, D | Walls, A C | Coronavirus | Nl63 | Vaccine | Viral fusion protein | Viral protein