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1ok6

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[[Image:1ok6.gif|left|200px]]
[[Image:1ok6.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1ok6 |SIZE=350|CAPTION= <scene name='initialview01'>1ok6</scene>, resolution 2.40&Aring;
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The line below this paragraph, containing "STRUCTURE_1ok6", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Gol+Binding+Site+For+Chain+A'>AC1</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-bisphosphate_aldolase Fructose-bisphosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.13 4.1.2.13] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1ok6| PDB=1ok6 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ok6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ok6 OCA], [http://www.ebi.ac.uk/pdbsum/1ok6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ok6 RCSB]</span>
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}}
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'''ORTHORHOMBIC CRYSTAL FORM OF AN ARCHAEAL FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE'''
'''ORTHORHOMBIC CRYSTAL FORM OF AN ARCHAEAL FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE'''
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[[Category: Zwart, P.]]
[[Category: Zwart, P.]]
[[Category: 6-bisphosphate]]
[[Category: 6-bisphosphate]]
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[[Category: aldolase]]
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[[Category: Aldolase]]
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[[Category: archaeal]]
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[[Category: Archaeal]]
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[[Category: fructose 1]]
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[[Category: Fructose 1]]
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[[Category: glycolytic]]
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[[Category: Glycolytic]]
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[[Category: lyase]]
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[[Category: Lyase]]
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[[Category: orthorhombic]]
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[[Category: Orthorhombic]]
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[[Category: schiff base]]
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[[Category: Schiff base]]
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[[Category: tim barrel]]
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[[Category: Tim barrel]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 03:57:07 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:46:30 2008''
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Revision as of 00:57, 3 May 2008

Template:STRUCTURE 1ok6

ORTHORHOMBIC CRYSTAL FORM OF AN ARCHAEAL FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE


Overview

Fructose-1,6-bisphosphate aldolase (FBPA) catalyzes the reversible cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate in the glycolytic pathway. FBPAs from archaeal organisms have recently been identified and characterized as a divergent family of proteins. Here, we report the first crystal structure of an archaeal FBPA at 1.9-A resolution. The structure of this 280-kDa protein complex was determined using single wavelength anomalous dispersion followed by 10-fold non-crystallographic symmetry averaging and refined to an R-factor of 14.9% (Rfree 17.9%). The protein forms a dimer of pentamers, consisting of subunits adopting the ubiquitous (betaalpha)8 barrel fold. Additionally, a crystal structure of the archaeal FBPA covalently bound to dihydroxyacetone phosphate was solved at 2.1-A resolution. Comparison of the active site residues with those of classical FBPAs, which share no significant sequence identity but display the same overall fold, reveals a common ancestry between these two families of FBPAs. Structural comparisons, furthermore, establish an evolutionary link to the triosephosphate isomerases, a superfamily hitherto considered independent from the superfamily of aldolases.

About this Structure

1OK6 is a Single protein structure of sequence from Thermoproteus tenax. Full crystallographic information is available from OCA.

Reference

Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins., Lorentzen E, Pohl E, Zwart P, Stark A, Russell RB, Knura T, Hensel R, Siebers B, J Biol Chem. 2003 Nov 21;278(47):47253-60. Epub 2003 Aug 26. PMID:12941964 Page seeded by OCA on Sat May 3 03:57:07 2008

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