Exonuclease
From Proteopedia
(Difference between revisions)
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**[[2jea]], [[2je6]], [[2jeb]] - SsExN-I (mutant) + ExN-II + RNA-binding protein 1<br /> | **[[2jea]], [[2je6]], [[2jeb]] - SsExN-I (mutant) + ExN-II + RNA-binding protein 1<br /> | ||
**[[2hbj]], [[2hbk]], [[2hbl]], [[2hbm]] – yExN Rrp6 (mutant) - yeast<br /> | **[[2hbj]], [[2hbk]], [[2hbl]], [[2hbm]] – yExN Rrp6 (mutant) - yeast<br /> | ||
| + | **[[5c0y]] - yExN Rrp6 (mutant) + RNA<br /> | ||
**[[2ja9]] – yExN Rrp40<br /> | **[[2ja9]] – yExN Rrp40<br /> | ||
**[[2vnu]] – yExN Rrp44 + DNA<br /> | **[[2vnu]] – yExN Rrp44 + DNA<br /> | ||
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**[[4wfc]] - yExN Rrp6 + Lrp1<br /> | **[[4wfc]] - yExN Rrp6 + Lrp1<br /> | ||
**[[4wfd]] - yExN Rrp6 + Lrp1 + Dob1<br /> | **[[4wfd]] - yExN Rrp6 + Lrp1 + Dob1<br /> | ||
| - | **[[4ifd]], [[4oo1]] - yExN Rrp6, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4, Rrp6, Ski6, Dis3 + RNA<br /> | + | **[[4ifd]], [[4oo1]], [[5k36]], [[5c0x]] - yExN Rrp6, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4, Rrp6, Ski6, Dis3 + RNA<br /> |
| + | **[[5jea]] - yExN Rrp45, Rrp42, Rrp43, Rrp40, Rrp46, Mtr3, Csl4, Rrp4, Ski6, Dis3 + endolysin + RNA<br /> | ||
| + | **[[5c0w]] - yExN Rrp45, Rrp42, Rrp43, Rrp40, Rrp46, Mtr3, Csl4, Rrp4, Ski6, Dis3 + Lrp1 + RNA<br /> | ||
| + | **[[5g06]] - yExN Rrp45, Rrp42, Rrp43, Rrp40, Rrp46, Mtr3, Csl4, Rrp4, Ski6, Dis3 + endolysin <br /> | ||
| - | * | + | *ssDNA-specific ExN |
| + | |||
| + | **[[5ght]] – TkExN – ''Thermococcus kodakarensis''<br /> | ||
| + | **[[5ghs]], [[5ghr]] – TkExN + polypeptide<br /> | ||
| + | **[[5f54]] – DrExN + dTMP<br /> | ||
| + | **[[5f55]] – DrExN + DNA<br /> | ||
| + | **[[5f56]] – DrExN + DNA + polypeptide<br /> | ||
| + | |||
| + | *3-5 ExN phoexo I | ||
| + | |||
| + | **[[4yor]], [[4yot]], [[4you]] – PhExN – ''Pyrococcus horikoshii''<br /> | ||
| + | **[[4yov]], [[4yow]], [[4yox]], [[4yoy]] – PhExN (mutant) + DNA<br /> | ||
| + | |||
| + | *ExN Trex | ||
| - | **[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br /> | ||
| - | **[[1w0h]] – hExn Eri1 nuclease domain <br /> | ||
| - | **[[1zbu]] - hExn Eri1<br /> | ||
| - | **[[1zbh]] - hExn Eri1 (mutant) + DNA<br /> | ||
**[[1y97]] – hExN Trex2<br /> | **[[1y97]] – hExN Trex2<br /> | ||
| - | **[[5aho]] – hExN Apollo<br /> | ||
**[[2o4g]] - mExN Trex1 + nucleotide – mouse<br /> | **[[2o4g]] - mExN Trex1 + nucleotide – mouse<br /> | ||
**[[3mxj]] - mExN Trex1<br /> | **[[3mxj]] - mExN Trex1<br /> | ||
**[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br /> | **[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br /> | ||
**[[2oa8]] - mExN Trex1 + DNA<br /> | **[[2oa8]] - mExN Trex1 + DNA<br /> | ||
| + | **[[4ynq]] - mExN Trex1 (mutant) + DNA<br /> | ||
**[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br /> | **[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br /> | ||
| + | |||
| + | *Other ExN | ||
| + | |||
| + | **[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br /> | ||
| + | **[[1w0h]] – hExn Eri1 nuclease domain <br /> | ||
| + | **[[1zbu]] - hExn Eri1<br /> | ||
| + | **[[1zbh]] - hExn Eri1 (mutant) + DNA<br /> | ||
| + | **[[5aho]] – hExN Apollo<br /> | ||
**[[2w45]] – H4ExN alkaline - Herpesvirus 4<br /> | **[[2w45]] – H4ExN alkaline - Herpesvirus 4<br /> | ||
**[[2w4b]] - H4ExN alkaline (mutant)<br /> | **[[2w4b]] - H4ExN alkaline (mutant)<br /> | ||
Revision as of 09:41, 10 May 2017
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3D Structures of exonuclease
Updated on 10-May-2017
References
- ↑ Mukherjee D, Fritz DT, Kilpatrick WJ, Gao M, Wilusz J. Analysis of RNA exonucleolytic activities in cellular extracts. Methods Mol Biol. 2004;257:193-212. PMID:14770007 doi:http://dx.doi.org/10.1385/1-59259-750-5:193
- ↑ Breyer WA, Matthews BW. Structure of Escherichia coli exonuclease I suggests how processivity is achieved. Nat Struct Biol. 2000 Dec;7(12):1125-8. PMID:11101894 doi:10.1038/81978
