1pyy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1pyy.jpg|left|200px]]
[[Image:1pyy.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1pyy |SIZE=350|CAPTION= <scene name='initialview01'>1pyy</scene>, resolution 2.42&Aring;
+
The line below this paragraph, containing "STRUCTURE_1pyy", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=OSU:N-OCTANOYLSUCROSE'>OSU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= PBPX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 Streptococcus pneumoniae])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1pyy| PDB=1pyy | SCENE= }}
-
|RELATEDENTRY=[[1qme|1QME]], [[1qmf|1QMF]], [[1k25|1K25]], [[1pmd|1PMD]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pyy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pyy OCA], [http://www.ebi.ac.uk/pdbsum/1pyy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pyy RCSB]</span>
+
-
}}
+
'''Double mutant PBP2x T338A/M339F from Streptococcus pneumoniae strain R6 at 2.4 A resolution'''
'''Double mutant PBP2x T338A/M339F from Streptococcus pneumoniae strain R6 at 2.4 A resolution'''
Line 33: Line 30:
[[Category: Vernet, T.]]
[[Category: Vernet, T.]]
[[Category: Zapun, A.]]
[[Category: Zapun, A.]]
-
[[Category: antibiotic resistance]]
+
[[Category: Antibiotic resistance]]
-
[[Category: cell wall]]
+
[[Category: Cell wall]]
-
[[Category: penicillin-binding protein]]
+
[[Category: Penicillin-binding protein]]
-
[[Category: peptidoglycan synthesis]]
+
[[Category: Peptidoglycan synthesis]]
-
[[Category: transmembrane]]
+
[[Category: Transmembrane]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 05:39:43 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:06:28 2008''
+

Revision as of 02:39, 3 May 2008

Template:STRUCTURE 1pyy

Double mutant PBP2x T338A/M339F from Streptococcus pneumoniae strain R6 at 2.4 A resolution


Overview

PBP2x is a primary determinant of beta-lactams resistance in Streptococcus pneumoniae. Altered PBP2x with multiple mutations have a reduced "affinity" for the antibiotics. An important polymorphism is found in PBP2x sequences from clinical resistant strains. To understand the mechanism of resistance, it is necessary to identify and characterize the relevant substitutions. Many similar PBP2x sequences from resistant isolates have the previously studied T338A mutation, adjacent to the active site Ser337. We report here the structural and functional analysis of the M339F substitution that is found in a subset of these sequences, originating from highly resistant strains. The M339F mutation causes a 4-10-fold reduction of the reaction rate with beta-lactams, depending on the molecular context. In addition, release of the inactivated antibiotic from the active site is up to 3-fold faster as a result from the M339F mutation. These effects measured in vitro are correlated with the level of beta-lactam resistance in vivo conferred by several PBP2x variants. Thus, a single amino acid difference between similar PBP2x from clinical isolates can strongly modulate the degree of beta-lactam resistance. The crystal structure of the double mutant T338A/M339F solved to a resolution of 2.4 A shows a distortion of the active site and a reorientation of the hydroxyl group of the active site Ser337, which can explain the kinetic effects of the mutations.

About this Structure

1PYY is a Single protein structure of sequence from Streptococcus pneumoniae. Full crystallographic information is available from OCA.

Reference

The structural modifications induced by the M339F substitution in PBP2x from Streptococcus pneumoniae further decreases the susceptibility to beta-lactams of resistant strains., Chesnel L, Pernot L, Lemaire D, Champelovier D, Croize J, Dideberg O, Vernet T, Zapun A, J Biol Chem. 2003 Nov 7;278(45):44448-56. Epub 2003 Aug 15. PMID:12923202 Page seeded by OCA on Sat May 3 05:39:43 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools