Hemoglobin 3D structures

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Line 7: Line 7:
**[[3mjp]] - Hb α+β - Japanese quail<br />
**[[3mjp]] - Hb α+β - Japanese quail<br />
**[[3mju]] - pHb α+β - pigeon<br />
**[[3mju]] - pHb α+β - pigeon<br />
 +
**[[5ker]], [[4h2l]] - Hb α+β - deer mouse<br />
 +
**[[4yu4]], [[4yu3]] - Hb α+β - mongoose<br />
**[[3odq]], [[3kmf]], [[3dut]], [[2dn2]], [[1xxt]], [[1xz2]], [[1rq3]], [[1uiw]], [[1kd2]], [[1lfl]], [[1dke]], [[1qi8]], [[1a3n]], [[2hhd]], [[2hhe]], [[1hga]], [[1hgb]], [[1hgc]], [[2hhb]], [[3hhb]], [[4hhb]], [[2hbs]], [[1a3o]], [[1hbs]], [[3p5q]], [[4n7n]] - hHb α+β human<br />
**[[3odq]], [[3kmf]], [[3dut]], [[2dn2]], [[1xxt]], [[1xz2]], [[1rq3]], [[1uiw]], [[1kd2]], [[1lfl]], [[1dke]], [[1qi8]], [[1a3n]], [[2hhd]], [[2hhe]], [[1hga]], [[1hgb]], [[1hgc]], [[2hhb]], [[3hhb]], [[4hhb]], [[2hbs]], [[1a3o]], [[1hbs]], [[3p5q]], [[4n7n]] - hHb α+β human<br />
 +
**[[5ni1]], [[5me2]] - hHb α+β - Volta phase<br />
**[[2dxm]] - hHb α+β – neutron<br />
**[[2dxm]] - hHb α+β – neutron<br />
**[[2h35]] - hHb α+β – NMR<br />
**[[2h35]] - hHb α+β – NMR<br />
**[[1fn3]], [[1nih]], [[4n7p]], [[4n7o]] - hHb α+β+ Ni containing heme<br />
**[[1fn3]], [[1nih]], [[4n7p]], [[4n7o]] - hHb α+β+ Ni containing heme<br />
**[[1qsh]], [[1qsi]] - hHb α+β+ Mg containing heme<br />
**[[1qsh]], [[1qsi]] - hHb α+β+ Mg containing heme<br />
-
**[[2w6v]] - hHb α+β+Xe<br />
 
**[[1xy0]], [[1xz5]], [[1xzu]], [[1xzv]], [[1y0a]], [[1y0c]], [[1y0t]], [[1y0w]], [[1y22]], [[1y2z]], [[1y31]], [[1y35]], [[1y45]], [[1y46]], [[1y4b]], [[1y4f]], [[1y4g]], [[1y4p]], [[1y4q]], [[1y4r]], [[1y4v]], [[1xye]], [[1xz4]], [[1xz7]], [[1y09]], [[1y0d]], [[1o1j]], [[1o1k]], [[1o1l]], [[1o1m]], [[1o1n]], [[1o1o]], [[1o1p]], [[1j7s]], [[1j7w]], [[1j7y]], [[1c7b]], [[1c7c]], [[1c7d]], [[1ch4]], [[1bzz]], [[6hbw]], [[1abw]], [[1a30]], [[1a00]], [[1a01]], [[1a0u]], [[1a0z]], [[1gbu]], [[1gli]], [[1hdb]], [[1dxt]], [[1dxu]], [[1dxv]], [[4mqh]], [[4mqi]] - hHb α+β (mutant)<br />
**[[1xy0]], [[1xz5]], [[1xzu]], [[1xzv]], [[1y0a]], [[1y0c]], [[1y0t]], [[1y0w]], [[1y22]], [[1y2z]], [[1y31]], [[1y35]], [[1y45]], [[1y46]], [[1y4b]], [[1y4f]], [[1y4g]], [[1y4p]], [[1y4q]], [[1y4r]], [[1y4v]], [[1xye]], [[1xz4]], [[1xz7]], [[1y09]], [[1y0d]], [[1o1j]], [[1o1k]], [[1o1l]], [[1o1m]], [[1o1n]], [[1o1o]], [[1o1p]], [[1j7s]], [[1j7w]], [[1j7y]], [[1c7b]], [[1c7c]], [[1c7d]], [[1ch4]], [[1bzz]], [[6hbw]], [[1abw]], [[1a30]], [[1a00]], [[1a01]], [[1a0u]], [[1a0z]], [[1gbu]], [[1gli]], [[1hdb]], [[1dxt]], [[1dxu]], [[1dxv]], [[4mqh]], [[4mqi]] - hHb α+β (mutant)<br />
**[[1bz0]] - hHb α+β A<br />
**[[1bz0]] - hHb α+β A<br />
Line 19: Line 21:
**[[1fdh]] - hHb α+β F<br />
**[[1fdh]] - hHb α+β F<br />
**[[2hbs]] - hHb α+β S (mutant)<br />
**[[2hbs]] - hHb α+β S (mutant)<br />
-
**[[3b75]] - hHb α+β + glucose<br />
 
-
**[[2d5z]], [[2d60]] - hHb α+β + L35<br />
 
-
**[[2w72]] - Hb α+β (mutant)+Xe<br />
 
-
**[[3ic0]], [[3ic2]], [[1qxd]], [[1qxe]], [[3r5i]] - hHb α+β + antisickling agent<br />
 
-
**[[1k0y]] - hHb α+β + sites-linking compound<br />
 
-
**[[1g9v]], [[4l7y]] - hHb α+β + allosteric effector<br />
 
-
**[[1b86]], [[3wcp]] - hHb α+β + phosphoglycerate<br />
 
-
**[[3pi8]], [[3pi9]], [[3pia]], [[2qsp]], [[2qss]], [[1hda]] - bHb α+β bovine<br />
 
**[[3pel]], [[3gou]], [[2qls]] - Hb α+β dog<br />
**[[3pel]], [[3gou]], [[2qls]] - Hb α+β dog<br />
**[[3ng6]], [[3nfe]], [[2aa1]] - TnHb α+β ''Trematomus newnesi''<br />
**[[3ng6]], [[3nfe]], [[2aa1]] - TnHb α+β ''Trematomus newnesi''<br />
Line 47: Line 41:
**[[1s0h]] - Hb α+β – donkey<br />
**[[1s0h]] - Hb α+β – donkey<br />
**[[1wmu]], [[1v75]] - GgHb α+βD- Geochelone gigantean<br />
**[[1wmu]], [[1v75]] - GgHb α+βD- Geochelone gigantean<br />
-
**[[1v4w]], [[1v4x]] - BtHb α+β Bluefin tuna<br />
+
**[[1v4w]], [[1v4x]] - BtHb α+β - Bluefin tuna<br />
**[[1it2]] - haHb α+β - hagfish<br />
**[[1it2]] - haHb α+β - hagfish<br />
**[[1fhj]] - Hb α+β – wolf<br />
**[[1fhj]] - Hb α+β – wolf<br />
Line 53: Line 47:
**[[1cg5]] - RsHb α+β – Red stingray<br />
**[[1cg5]] - RsHb α+β – Red stingray<br />
**[[1hbr]] - cHb α+β D – chicken<br />
**[[1hbr]] - cHb α+β D – chicken<br />
-
**[[3bev]] – cHb α + MHC I + β-microglobulin<br />
 
**[[3lhb]], [[1f5o]], [[1uc3]] - SlHb α+β – Sea lamprey<br />
**[[3lhb]], [[1f5o]], [[1uc3]] - SlHb α+β – Sea lamprey<br />
**[[1hds]] - Hb α+β S – white-tail deer<br />
**[[1hds]] - Hb α+β S – white-tail deer<br />
-
**[[4h2l]] - Hb α+β – deer mouse<br />
 
**[[2b7h]] - Hb α+β - crab-eating fox<br />
**[[2b7h]] - Hb α+β - crab-eating fox<br />
**[[3lqd]] - Hb α+β - European hare<br />
**[[3lqd]] - Hb α+β - European hare<br />
Line 62: Line 54:
**[[3vre]], [[3vrg]] - maHb α+β – mammoth<br />
**[[3vre]], [[3vrg]] - maHb α+β – mammoth<br />
**[[3wr1]] - Hb α+β - cormorant<br />
**[[3wr1]] - Hb α+β - cormorant<br />
 +
**[[3pi8]], [[3pi9]], [[3pia]], [[2qsp]], [[2qss]], [[1hda]] - bHb α+β - bovine<br />
 +
 +
*Hemoglobin α subunit + β subunit complex
 +
 +
**[[2w6v]] - hHb α+β+Xe<br />
 +
**[[2w72]] - Hb α+β (mutant)+Xe<br />
 +
**[[3b75]] - hHb α+β + glucose<br />
 +
**[[2d5z]], [[2d60]] - hHb α+β + L35<br />
 +
**[[3ic0]], [[3ic2]], [[1qxd]], [[1qxe]], [[3r5i]], [[5urc]], [[5ufj]], [[5u3i]], [[5e83]], [[4rom]], [[4rol]] - hHb α+β + antisickling agent<br />
 +
**[[5ucu]] - hHb α+β + H2S<br />
 +
**[[5kdq]] - hHb α+β + aryloxyalkanoic acid<br />
 +
**[[3whm]] - hHb α+β + crown ether<br />
 +
**[[1k0y]] - hHb α+β + sites-linking compound<br />
 +
**[[1g9v]], [[4l7y]] - hHb α+β + allosteric effector<br />
 +
**[[1b86]], [[3wcp]] - hHb α+β + phosphoglycerate<br />
 +
**[[3bev]] – cHb α + MHC I + β-microglobulin<br />
*Hemoglobin α subunit+ γ-2 subunit
*Hemoglobin α subunit+ γ-2 subunit
Line 107: Line 115:
**[[2hbg]] - GdHb – ''Glycera dibranchiata''<br />
**[[2hbg]] - GdHb – ''Glycera dibranchiata''<br />
**[[3qqq]] – Hb non-symbiotic – Poison peach<br />
**[[3qqq]] – Hb non-symbiotic – Poison peach<br />
-
**[[3qqr]] – Hb non-legume – ''Parasponia andersonii''
+
**[[3qqr]] – Hb non-legume – ''Parasponia andersonii'' <br />
 +
**[[4bja]] - Hb – ''Caenorhabditis elegans''<br />
 +
**[[3wtg]] - Hb – emu<br />
*Mini hemoglobin
*Mini hemoglobin
Line 120: Line 130:
**[[2zs0]], [[2zs1]], [[2zfo]], [[2d2m]], [[2d2n]] – GiHb+O2 – Beard worm<br />
**[[2zs0]], [[2zs1]], [[2zfo]], [[2d2m]], [[2d2n]] – GiHb+O2 – Beard worm<br />
**[[1yhu]] – GiHb+O2 – Tube worm<br />
**[[1yhu]] – GiHb+O2 – Tube worm<br />
 +
**[[3wcw]] - GiHb+O2 – Vent tube worm<br />
 +
**[[4wch]] – GIHb chain D + O2 – ''Glossoscolex taulistus<''br />
*Truncated hemoglobin
*Truncated hemoglobin
Line 125: Line 137:
**[[1dlw]] – TrHb – ''Paramecium caudatum''<br />
**[[1dlw]] – TrHb – ''Paramecium caudatum''<br />
**[[2bkm]] - TrHb +O2 - ''Geobacillus stearothermophilus''<br />
**[[2bkm]] - TrHb +O2 - ''Geobacillus stearothermophilus''<br />
-
**[[1idr]] – MtTrHb + O2 - ''Mycobacterium tuberculosis''<br />
+
**[[5ab8]] - MtTrHb - ''Mycobacterium tuberculosis''<br />
 +
**[[1idr]] – MtTrHb + O2 <br />
**[[2ig3]] – TrHb III +CN – ''Campylobacter jejuni''<br />
**[[2ig3]] – TrHb III +CN – ''Campylobacter jejuni''<br />
**[[1ux8]] – TrHb+CN – ''Bacillus subtilis''<br />
**[[1ux8]] – TrHb+CN – ''Bacillus subtilis''<br />
 +
**[[5v3t]] - BaTrHb+CN – ''Bacillus anthracis''<br />
 +
**[[5v3u]], [[5v3v]] – BaTrHb (mutant) +CN <br />
**[[1rte]], [[1s56]] – MtTrHb + CN<br />
**[[1rte]], [[1s56]] – MtTrHb + CN<br />
**[[1s61]] – MtTrHb+ butyl-isocyanide<br />
**[[1s61]] – MtTrHb+ butyl-isocyanide<br />
Line 133: Line 148:
**[[3aq5]] – TpHb+ O2 – ''Tetrahymena pyriformis''<br />
**[[3aq5]] – TpHb+ O2 – ''Tetrahymena pyriformis''<br />
**[[3aq6]] – TpHb III<br />
**[[3aq6]] – TpHb III<br />
-
**[[3aq7]], [[3aq8]] - TpHb III (mutant
+
**[[3aq7]], [[3aq8]] - TpHb III (mutant)<br />
 +
**[[4c44]], [[4c0n]] - TrHb – ''Arabidopsis thaliana''<br />
*Methemoglobin α subunit + β subunit
*Methemoglobin α subunit + β subunit
Line 151: Line 167:
**[[1jy7]], [[1bz1]] - hMetHb α+β<br />
**[[1jy7]], [[1bz1]] - hMetHb α+β<br />
**[[1vwt]] - hMetHb α+β (mutant)<br />
**[[1vwt]] - hMetHb α+β (mutant)<br />
 +
**[[4xs0]] - hMetHb α+β + ISDH<br />
**[[1c40]] - BgMetHb α+β<br />
**[[1c40]] - BgMetHb α+β<br />
**[[1moh]] - LpMetHb + H2S - ''Lucina pectinata''<br />
**[[1moh]] - LpMetHb + H2S - ''Lucina pectinata''<br />
Line 169: Line 186:
**[[3gkv]] - roHb α+β + CO – rockcod<br />
**[[3gkv]] - roHb α+β + CO – rockcod<br />
**[[3d1k]], [[1la6]], [[1t1n]] - TnHb α+β + CO<br />
**[[3d1k]], [[1la6]], [[1t1n]] - TnHb α+β + CO<br />
-
**[[3d17]], [[1yzi]], [[1j3y]], [[1j3z]], [[1j40]], [[1j41]], [[1ljw]], [[1ird]], [[1bbb]], [[1hco]], [[2hco]], [[2dn3]], [[3s65]] - hHb α+β + CO<br />
+
**[[3d17]], [[1yzi]], [[1j3y]], [[1j3z]], [[1j40]], [[1j41]], [[1ljw]], [[1ird]], [[1bbb]], [[1hco]], [[2hco]], [[2dn3]], [[3s65]], [[5e6e]] - hHb α+β + CO<br />
**[[1mko]] - hHb α+β A + CO<br />
**[[1mko]] - hHb α+β A + CO<br />
**[[1cbm]] - hHb α+β β4 + CO<br />
**[[1cbm]] - hHb α+β β4 + CO<br />
Line 176: Line 193:
**[[1coh]] - - hHb α+β Co containing heme + CO<br />
**[[1coh]] - - hHb α+β Co containing heme + CO<br />
**[[1hab]], [[1hac]], [[1sdk]], [[1sdl]] - hHb α+β A crosslinked + CO<br />
**[[1hab]], [[1hac]], [[1sdk]], [[1sdl]] - hHb α+β A crosslinked + CO<br />
-
**[[3nl7]], [[3nml]], [[3nmm]], [[1yvq]], [[1yvt]], [[1yff]], [[1aj9]], [[1rvw]], [[3qjb]], [[3qjc]], [[3qjd]], [[3qje]], [[3s66]], [[4mqc]], [[4mqg]] - hHb α+β (mutant) + CO<br />
+
**[[3nl7]], [[3nml]], [[3nmm]], [[1yvq]], [[1yvt]], [[1yff]], [[1aj9]], [[1rvw]], [[3qjb]], [[3qjc]], [[3qjd]], [[3qje]], [[3s66]], [[4mqc]], [[4mqg]], [[5sw7]] - hHb α+β (mutant) + CO<br />
**[[1k1k]] - hHb α+β C (mutant) + CO<br />
**[[1k1k]] - hHb α+β C (mutant) + CO<br />
**[[1iwh]] - hoHb α+β +CO<br />
**[[1iwh]] - hoHb α+β +CO<br />
Line 212: Line 229:
**[[2olp]] - LpHb+O2<br />
**[[2olp]] - LpHb+O2<br />
**[[3ciu]] - bHb α+β +O+glycosylation<br />
**[[3ciu]] - bHb α+β +O+glycosylation<br />
-
**[[2dn1]], [[1lfq]], [[1lft]], [[1lfv]], [[1lfy]], [[1lfz]], [[1gzx]], [[1thb]], [[1hho]] – hHb α+β +O2<br />
+
**[[2dn1]], [[1lfq]], [[1lft]], [[1lfv]], [[1lfy]], [[1lfz]], [[1gzx]], [[1thb]], [[1hho]], [[5hy8]] – hHb α+β +O2<br />
**[[1yeo]], [[1yh9]], [[1yhe]], [[1yhr]], [[1yie]], [[1yih]], [[1yen]], [[1yeq]], [[1yeu]], [[1yev]], [[1yg5]], [[1ygd]], [[1ygf]], [[1y8w]], [[1ydz]], [[1ye0]], [[1ye1]], [[1ye2]], [[1y7z]], [[1y83]], [[1y85]], [[1y5f]], [[1y5j]], [[1y5k]], [[1y7c]], [[1y7d]], [[1y7g]], [[1gbv]] - hHb α+β (mutant) + O2<br />
**[[1yeo]], [[1yh9]], [[1yhe]], [[1yhr]], [[1yie]], [[1yih]], [[1yen]], [[1yeq]], [[1yeu]], [[1yev]], [[1yg5]], [[1ygd]], [[1ygf]], [[1y8w]], [[1ydz]], [[1ye0]], [[1ye1]], [[1ye2]], [[1y7z]], [[1y83]], [[1y85]], [[1y5f]], [[1y5j]], [[1y5k]], [[1y7c]], [[1y7d]], [[1y7g]], [[1gbv]] - hHb α+β (mutant) + O2<br />
**[[1faw]] - Hb α+β +O2 – Grayleg goose<br />
**[[1faw]] - Hb α+β +O2 – Grayleg goose<br />
Line 244: Line 261:
**[[2lhb]] – slHb V + CN<br />
**[[2lhb]] – slHb V + CN<br />
**[[4odc]] – TbHb α+β + CN<br />
**[[4odc]] – TbHb α+β + CN<br />
 +
**[[5c6e]] – hoHb α+β + CN<br />
-
*Hemoglobin α subunit + β subunit
+
*Hemoglobin α subunit + β subunit + NO2
**[[3d7o]], [[3onz]], [[3oo4]], [[3oo5]] - hHb α+β+NO2<br />
**[[3d7o]], [[3onz]], [[3oo4]], [[3oo5]] - hHb α+β+NO2<br />
Line 251: Line 269:
**[[4m4b]], [[1buw]], [[4m4a]] - hHb α+β + nitroso derivative<br />
**[[4m4b]], [[1buw]], [[4m4a]] - hHb α+β + nitroso derivative<br />
-
*Hemoglobin α subunit + β subunit
+
*Hemoglobin α subunit + β subunit + NO
**[[4g51]] – TbHb α+β + NO <br />
**[[4g51]] – TbHb α+β + NO <br />
**[[1rqa]] - hHb α+β (mutant) + NO<br />
**[[1rqa]] - hHb α+β (mutant) + NO<br />
**[[1rps]], [[1rq4]] - hHb α+β+NO<br />
**[[1rps]], [[1rq4]] - hHb α+β+NO<br />
 +
**[[5e29]] - hHb α+β + NO + drug<br />
*Dimeric hemoglobin (Globin-1)
*Dimeric hemoglobin (Globin-1)
Line 277: Line 296:
**[[4x0l]] - hHb α+β + haptoglobin + O2<br />
**[[4x0l]] - hHb α+β + haptoglobin + O2<br />
**[[5hu6]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + O2<br />
**[[5hu6]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + O2<br />
-
**[[4wjg]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + haptoglobin receptor A + O2<br />
+
**[[4wjg]], [[5jdo]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + haptoglobin receptor A + O2<br />
**[[4f4o]] - pHb α+β + haptoglobin<br />
**[[4f4o]] - pHb α+β + haptoglobin<br />
**[[3ia3]] - hHb α+α –Hb stabilizing protein<br />
**[[3ia3]] - hHb α+α –Hb stabilizing protein<br />
**[[1z8u]], [[1y01]] - hHb α+α–Hb stabilizing protein (mutant)<br />
**[[1z8u]], [[1y01]] - hHb α+α–Hb stabilizing protein (mutant)<br />
 +
**[[5ee4]] - hHb +β + Hb-haptoglobin utilization protein + O2<br />
*Flavohemoglobin
*Flavohemoglobin

Revision as of 06:53, 12 June 2017

Updated on 12-June-2017 - For a general description of the protein see Hemoglobin

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky, Joel L. Sussman

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