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5cx8
From Proteopedia
(Difference between revisions)
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==Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.== | ==Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.== | ||
| - | <StructureSection load='5cx8' size='340' side='right' caption='[[5cx8]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='5cx8' size='340' side='right'caption='[[5cx8]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5cx8]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CX8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CX8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5cx8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Porgi Porgi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CX8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CX8 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3DO:3-DEOXY-BETA-D-RIBO-HEXOPYRANOSE'>3DO</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=RP3:3-DEOXY-D-RIBOFURANOSE-5-PHOSPHATE'>RP3</scene>, <scene name='pdbligand=TG6:6-O-PHOSPHONO-D-TAGATOSE'>TG6</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3DO:3-DEOXY-BETA-D-RIBO-HEXOPYRANOSE'>3DO</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=RP3:3-DEOXY-D-RIBOFURANOSE-5-PHOSPHATE'>RP3</scene>, <scene name='pdbligand=TG6:6-O-PHOSPHONO-D-TAGATOSE'>TG6</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ragB, PG_0186 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242619 PORGI])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cx8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cx8 OCA], [http://pdbe.org/5cx8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cx8 RCSB], [http://www.ebi.ac.uk/pdbsum/5cx8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cx8 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cx8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cx8 OCA], [http://pdbe.org/5cx8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cx8 RCSB], [http://www.ebi.ac.uk/pdbsum/5cx8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cx8 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Porgi]] | ||
[[Category: Garcia-Ferrer, I]] | [[Category: Garcia-Ferrer, I]] | ||
[[Category: Gomis-Ruth, F X]] | [[Category: Gomis-Ruth, F X]] | ||
Revision as of 10:28, 1 April 2020
Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.
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