This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4gvg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ)==
==Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ)==
-
<StructureSection load='4gvg' size='340' side='right' caption='[[4gvg]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='4gvg' size='340' side='right'caption='[[4gvg]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4gvg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GVG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GVG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4gvg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GVG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GVG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gvf|4gvf]], [[4gvh|4gvh]], [[4gvi|4gvi]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gvg OCA], [https://pdbe.org/4gvg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gvg RCSB], [https://www.ebi.ac.uk/pdbsum/4gvg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gvg ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nagZ, STM1209 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-N-acetylhexosaminidase Beta-N-acetylhexosaminidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.52 3.2.1.52] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gvg OCA], [http://pdbe.org/4gvg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4gvg RCSB], [http://www.ebi.ac.uk/pdbsum/4gvg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4gvg ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NAGZ_SALTY NAGZ_SALTY]] Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides (By similarity).
+
[https://www.uniprot.org/uniprot/NAGZ_SALTY NAGZ_SALTY] Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 21:
==See Also==
==See Also==
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
 +
*[[Beta-Hexosaminidase 3D structures|Beta-Hexosaminidase 3D structures]]
 +
*[[Beta-N-acetylhexosaminidase 3D structures|Beta-N-acetylhexosaminidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-N-acetylhexosaminidase]]
+
[[Category: Large Structures]]
-
[[Category: Salty]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
-
[[Category: Bacik, J P]]
+
[[Category: Bacik JP]]
-
[[Category: Mark, B L]]
+
[[Category: Mark BL]]
-
[[Category: Hydrolase]]
+
-
[[Category: Tim-barrel]]
+

Revision as of 07:20, 26 October 2022

Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ)

PDB ID 4gvg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4gvg"
Personal tools