This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5mg0
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Structure of PAS-GAF fragment of Deinococcus phytochrome by serial femtosecond crystallography== | |
| - | + | <StructureSection load='5mg0' size='340' side='right' caption='[[5mg0]], [[Resolution|resolution]] 1.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[5mg0]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MG0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MG0 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> | |
| - | [[Category: | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidine_kinase Histidine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.13.3 2.7.13.3] </span></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mg0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mg0 OCA], [http://pdbe.org/5mg0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mg0 RCSB], [http://www.ebi.ac.uk/pdbsum/5mg0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mg0 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/BPHY_DEIRA BPHY_DEIRA]] Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Could also absorb green light. May participate in regulating pigment synthesis like the carotenoid deinoxanthin which could protect the bacterium from intense visible light. | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Histidine kinase]] | ||
| + | [[Category: Aller, P]] | ||
| + | [[Category: Alonso-Mori, R]] | ||
| + | [[Category: Braeuer, P]] | ||
| + | [[Category: Brewster, A S]] | ||
| + | [[Category: Burgie, E S]] | ||
| + | [[Category: Clinger, J]] | ||
| + | [[Category: Fuller, F D]] | ||
| + | [[Category: Gul, S]] | ||
| + | [[Category: Hutchison, C]] | ||
| + | [[Category: Kern, J]] | ||
| + | [[Category: Miller, M D]] | ||
| + | [[Category: Orville, A M]] | ||
| + | [[Category: Phillips, G N]] | ||
| + | [[Category: Sauter, N K]] | ||
| + | [[Category: Vierstra, R D]] | ||
| + | [[Category: Yachandra, V K]] | ||
| + | [[Category: Yano, J]] | ||
| + | [[Category: Young, I D]] | ||
| + | [[Category: Bilin]] | ||
| + | [[Category: Photoreceptor]] | ||
| + | [[Category: Phytochrome]] | ||
| + | [[Category: Sfx]] | ||
| + | [[Category: Transferase]] | ||
Revision as of 01:39, 11 March 2017
Structure of PAS-GAF fragment of Deinococcus phytochrome by serial femtosecond crystallography
| |||||||||||
Categories: Histidine kinase | Aller, P | Alonso-Mori, R | Braeuer, P | Brewster, A S | Burgie, E S | Clinger, J | Fuller, F D | Gul, S | Hutchison, C | Kern, J | Miller, M D | Orville, A M | Phillips, G N | Sauter, N K | Vierstra, R D | Yachandra, V K | Yano, J | Young, I D | Bilin | Photoreceptor | Phytochrome | Sfx | Transferase
