1r0r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1r0r.jpg|left|200px]]
[[Image:1r0r.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1r0r |SIZE=350|CAPTION= <scene name='initialview01'>1r0r</scene>, resolution 1.10&Aring;
+
The line below this paragraph, containing "STRUCTURE_1r0r", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Subtilisin Subtilisin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.62 3.4.21.62] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1r0r| PDB=1r0r | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1r0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r0r OCA], [http://www.ebi.ac.uk/pdbsum/1r0r PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1r0r RCSB]</span>
+
-
}}
+
'''1.1 Angstrom Resolution Structure of the Complex Between the Protein Inhibitor, OMTKY3, and the Serine Protease, Subtilisin Carlsberg'''
'''1.1 Angstrom Resolution Structure of the Complex Between the Protein Inhibitor, OMTKY3, and the Serine Protease, Subtilisin Carlsberg'''
Line 30: Line 27:
[[Category: Murphy, K P.]]
[[Category: Murphy, K P.]]
[[Category: Ramaswamy, S.]]
[[Category: Ramaswamy, S.]]
-
[[Category: high resolution]]
+
[[Category: High resolution]]
-
[[Category: protein inhibitor]]
+
[[Category: Protein inhibitor]]
-
[[Category: serine protease]]
+
[[Category: Serine protease]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 06:55:59 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:21:41 2008''
+

Revision as of 03:56, 3 May 2008

Template:STRUCTURE 1r0r

1.1 Angstrom Resolution Structure of the Complex Between the Protein Inhibitor, OMTKY3, and the Serine Protease, Subtilisin Carlsberg


Overview

Proteins with flexible binding surfaces can interact with numerous binding partners. However, this promiscuity is more difficult to understand in "rigid-body" proteins, whose binding results in little, or no, change in the position of backbone atoms. The binding of Kazal inhibitors to serine proteases is considered a classic case of rigid-body binding, although they bind to a wide range of proteases. We have studied the thermodynamics of binding of the Kazal serine protease inhibitor, turkey ovomucoid third domain (OMTKY3), to the serine protease subtilisin Carlsberg using isothermal titration calorimetry and have determined the crystal structure of the complex at very high resolution (1.1A). Comparison of the binding energetics and structure to other OMTKY3 interactions demonstrates that small changes in the position of side-chains can make significant contributions to the binding thermodynamics, including the enthalpy of binding. These effects emphasize that small, "rigid-body" proteins are still dynamic structures, and these dynamics make contributions to both the enthalpy and entropy of binding interactions.

About this Structure

1R0R is a Protein complex structure of sequences from Bacillus licheniformis and Meleagris gallopavo. Full crystallographic information is available from OCA.

Reference

Structure and energetics of protein-protein interactions: the role of conformational heterogeneity in OMTKY3 binding to serine proteases., Horn JR, Ramaswamy S, Murphy KP, J Mol Biol. 2003 Aug 8;331(2):497-508. PMID:12888355 Page seeded by OCA on Sat May 3 06:55:59 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools