1r2b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1r2b.gif|left|200px]]
[[Image:1r2b.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1r2b |SIZE=350|CAPTION= <scene name='initialview01'>1r2b</scene>, resolution 2.2&Aring;
+
The line below this paragraph, containing "STRUCTURE_1r2b", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND=
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= BCL6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), NCOR2 OR CTG26 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1r2b| PDB=1r2b | SCENE= }}
-
|RELATEDENTRY=[[1r28|1R28]], [[1r29|1R29]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1r2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r2b OCA], [http://www.ebi.ac.uk/pdbsum/1r2b PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1r2b RCSB]</span>
+
-
}}
+
'''Crystal structure of the BCL6 BTB domain complexed with a SMRT co-repressor peptide'''
'''Crystal structure of the BCL6 BTB domain complexed with a SMRT co-repressor peptide'''
Line 37: Line 34:
[[Category: Melnick, A.]]
[[Category: Melnick, A.]]
[[Category: Prive, G G.]]
[[Category: Prive, G G.]]
-
[[Category: b-cell lymphoma]]
+
[[Category: B-cell lymphoma]]
-
[[Category: btb domain]]
+
[[Category: Btb domain]]
-
[[Category: hdac complex]]
+
[[Category: Hdac complex]]
-
[[Category: transcriptional repression]]
+
[[Category: Transcriptional repression]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 06:59:19 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:22:15 2008''
+

Revision as of 03:59, 3 May 2008

Template:STRUCTURE 1r2b

Crystal structure of the BCL6 BTB domain complexed with a SMRT co-repressor peptide


Contents

Overview

BCL6 encodes a transcription factor that represses genes necessary for the terminal differentiation of lymphocytes within germinal centers, and the misregulated expression of this factor is strongly implicated in several types of B cell lymphoma. The homodimeric BTB domain of BCL6 (also known as the POZ domain) is required for the repression activity of the protein and interacts directly with the SMRT and N-CoR corepressors that are found within large multiprotein histone deacetylase-containing complexes. We have identified a 17 residue fragment from SMRT that binds to the BCL6 BTB domain, and determined the crystal structure of the complex to 2.2 A. Two SMRT fragments bind symmetrically to the BCL6 BTB homodimer and, in combination with biochemical and in vivo data, the structure provides insight into the basis of transcriptional repression by this critical B cell lymphoma protein.

Disease

Known disease associated with this structure: Lymphoma, B-cell OMIM:[109565]

About this Structure

1R2B is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Mechanism of SMRT corepressor recruitment by the BCL6 BTB domain., Ahmad KF, Melnick A, Lax S, Bouchard D, Liu J, Kiang CL, Mayer S, Takahashi S, Licht JD, Prive GG, Mol Cell. 2003 Dec;12(6):1551-64. PMID:14690607 Page seeded by OCA on Sat May 3 06:59:19 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools