1r68

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[[Image:1r68.gif|left|200px]]
[[Image:1r68.gif|left|200px]]
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{{Structure
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|PDB= 1r68 |SIZE=350|CAPTION= <scene name='initialview01'>1r68</scene>, resolution 1.20&Aring;
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The line below this paragraph, containing "STRUCTURE_1r68", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=MAR:4&#39;-EPI-4&#39;-(2-DEOXYFUCOSE)DAUNOMYCIN'>MAR</scene>
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{{STRUCTURE_1r68| PDB=1r68 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1r68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r68 OCA], [http://www.ebi.ac.uk/pdbsum/1r68 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1r68 RCSB]</span>
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'''Role of the amino sugar in DNA binding of disaccharide anthracyclines: crystal structure of MAR70/d(CGATCG) complex'''
'''Role of the amino sugar in DNA binding of disaccharide anthracyclines: crystal structure of MAR70/d(CGATCG) complex'''
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==About this Structure==
==About this Structure==
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1R68 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R68 OCA].
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R68 OCA].
==Reference==
==Reference==
Role of the amino sugar in the DNA binding of disaccharide anthracyclines: crystal structure of the complex MAR70/d(CGATCG)., Temperini C, Cirilli M, Aschi M, Ughetto G, Bioorg Med Chem. 2005 Mar 1;13(5):1673-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15698785 15698785]
Role of the amino sugar in the DNA binding of disaccharide anthracyclines: crystal structure of the complex MAR70/d(CGATCG)., Temperini C, Cirilli M, Aschi M, Ughetto G, Bioorg Med Chem. 2005 Mar 1;13(5):1673-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15698785 15698785]
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[[Category: Protein complex]]
 
[[Category: Aschi, M.]]
[[Category: Aschi, M.]]
[[Category: Cirilli, M.]]
[[Category: Cirilli, M.]]
[[Category: Temperini, C.]]
[[Category: Temperini, C.]]
[[Category: Ughetto, G.]]
[[Category: Ughetto, G.]]
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[[Category: double helix]]
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[[Category: Double helix]]
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[[Category: drug-dna complex]]
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[[Category: Drug-dna complex]]
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[[Category: right handed dna]]
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[[Category: Right handed dna]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:08:01 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:23:48 2008''
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Revision as of 04:08, 3 May 2008

Template:STRUCTURE 1r68

Role of the amino sugar in DNA binding of disaccharide anthracyclines: crystal structure of MAR70/d(CGATCG) complex


Overview

Disaccharide anthracyclines analogues have been shown to exhibit different antitumour activity as compared with parents compounds doxorubicin and daunomycin. Here we report the crystal structure of the disaccharide analog MAR70 complexed with the DNA hexamer d(CGATCG). The structure has been solved at 1.54A resolution and is similar to previous crystallized anthracycline-DNA complexes with both sugar rings of the disaccharide chain lying in the DNA minor groove. Comparison with the structure of MEN10755 another disaccharide anthracycline co-crystallized with the same DNA hexamer suggests a correlation between the position of the amino sugar on the disaccharide chain and the conformation of this moiety when binding to DNA. This is discussed with respect to the influence on drug activity and on the possible interaction with other cellular targets.

About this Structure

Full crystallographic information is available from OCA.

Reference

Role of the amino sugar in the DNA binding of disaccharide anthracyclines: crystal structure of the complex MAR70/d(CGATCG)., Temperini C, Cirilli M, Aschi M, Ughetto G, Bioorg Med Chem. 2005 Mar 1;13(5):1673-9. PMID:15698785 Page seeded by OCA on Sat May 3 07:08:01 2008

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