User:Charli Barbet/Sandbox

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On one hand, the SH2 domain recognizes phosphorylated residues which are mainly tyrosines. The recognized tyrosines present a caracteristic motif for recognition : NH2-pYXNX-COOH.
On one hand, the SH2 domain recognizes phosphorylated residues which are mainly tyrosines. The recognized tyrosines present a caracteristic motif for recognition : NH2-pYXNX-COOH.
-
- pY representing the phosphorylated tyrosine.
+
- pY representing the phosphorylated tyrosine.
-
- N for Asparagine
+
- N for Asparagine
-
- X for a random residue
+
- X for a random residue
Thus by the special recognition of this motif, the binding of the 2 molecules is very specific. These motifs are highly expressed in several cellular proteins like Receptor Tyrosine Kinase (epidermal growth factor receptor, fibroblast growth factor receptor, nerve growth factor receptor) but equally in proteins that are not RTK kinases (BCR-Ab1, focal adhesion kinase, insulin receptor substrate-1).
Thus by the special recognition of this motif, the binding of the 2 molecules is very specific. These motifs are highly expressed in several cellular proteins like Receptor Tyrosine Kinase (epidermal growth factor receptor, fibroblast growth factor receptor, nerve growth factor receptor) but equally in proteins that are not RTK kinases (BCR-Ab1, focal adhesion kinase, insulin receptor substrate-1).

Revision as of 10:30, 12 January 2017

==Your Heading Here (maybe something like 'Structure')== 2

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References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

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Charli Barbet

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