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5m0r

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Revision as of 03:32, 16 November 2017

Cryo-EM reconstruction of the maedi-visna virus (MVV) strand transfer complex

Structural highlights

5m0r is a 22 chain structure with sequence from Mvv. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:	pol (MVV)
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[POL_VILVK] During replicative cycle of retroviruses, the reverse-transcribed viral DNA is integrated into the host chromosome by the viral integrase enzyme. RNase H activity is associated with the reverse transcriptase.

Publication Abstract from PubMed

Retroviral integrase (IN) functions within the intasome nucleoprotein complex to catalyze insertion of viral DNA into cellular chromatin. Using cryo-electron microscopy, we now visualize the functional maedi-visna lentivirus intasome at 4.9 angstrom resolution. The intasome comprises a homo-hexadecamer of IN with a tetramer-of-tetramers architecture featuring eight structurally distinct types of IN protomers supporting two catalytically competent subunits. The conserved intasomal core, previously observed in simpler retroviral systems, is formed between two IN tetramers, with a pair of C-terminal domains from flanking tetramers completing the synaptic interface. Our results explain how HIV-1 IN, which self-associates into higher-order multimers, can form a functional intasome, reconcile the bulk of early HIV-1 IN biochemical and structural data, and provide a lentiviral platform for design of HIV-1 IN inhibitors.

A supramolecular assembly mediates lentiviral DNA integration.,Ballandras-Colas A, Maskell DP, Serrao E, Locke J, Swuec P, Jonsson SR, Kotecha A, Cook NJ, Pye VE, Taylor IA, Andresdottir V, Engelman AN, Costa A, Cherepanov P Science. 2017 Jan 6;355(6320):93-95. doi: 10.1126/science.aah7002. PMID:28059770^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Ballandras-Colas A, Maskell DP, Serrao E, Locke J, Swuec P, Jonsson SR, Kotecha A, Cook NJ, Pye VE, Taylor IA, Andresdottir V, Engelman AN, Costa A, Cherepanov P. A supramolecular assembly mediates lentiviral DNA integration. Science. 2017 Jan 6;355(6320):93-95. doi: 10.1126/science.aah7002. PMID:28059770 doi:http://dx.doi.org/10.1126/science.aah7002

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5m0r"

@@ Line 3: / Line 3: @@
 <StructureSection load='5m0r' size='340' side='right' caption='[[5m0r]], [[Resolution|resolution]] 8.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5m0r]] is a 22 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M0R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M0R FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5m0r]] is a 22 chain structure with sequence from [http://en.wikipedia.org/wiki/Mvv Mvv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M0R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M0R FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m0r OCA], [http://pdbe.org/5m0r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m0r RCSB], [http://www.ebi.ac.uk/pdbsum/5m0r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m0r ProSAT]</span></td></tr>
+</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pol ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36374 MVV])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m0r OCA], [http://pdbe.org/5m0r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m0r RCSB], [http://www.ebi.ac.uk/pdbsum/5m0r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m0r ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 21: / Line 22: @@
 __TOC__
 </StructureSection>
+[[Category: Mvv]]
 [[Category: Ballandras-Colas, A]]
 [[Category: Cherepanov, P]]

5m0r

From Proteopedia

Revision as of 03:32, 16 November 2017

Cryo-EM reconstruction of the maedi-visna virus (MVV) strand transfer complex

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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