This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5tpb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Binding domain of BoNT/A complexed with ganglioside variant==
==Binding domain of BoNT/A complexed with ganglioside variant==
-
<StructureSection load='5tpb' size='340' side='right' caption='[[5tpb]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='5tpb' size='340' side='right'caption='[[5tpb]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5tpb]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TPB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TPB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5tpb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_botulinus"_van_ermengem_1896 "bacillus botulinus" van ermengem 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TPB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5TPB FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vu9|2vu9]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vu9|2vu9]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">botA, atx, bna ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1491 "Bacillus botulinus" van Ermengem 1896])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Bontoxilysin Bontoxilysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.69 3.4.24.69] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Bontoxilysin Bontoxilysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.69 3.4.24.69] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tpb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tpb OCA], [http://pdbe.org/5tpb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tpb RCSB], [http://www.ebi.ac.uk/pdbsum/5tpb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tpb ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5tpb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tpb OCA], [http://pdbe.org/5tpb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tpb RCSB], [http://www.ebi.ac.uk/pdbsum/5tpb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tpb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 20: Line 21:
</div>
</div>
<div class="pdbe-citations 5tpb" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5tpb" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Botulinum neurotoxin 3D structures|Botulinum neurotoxin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Bacillus botulinus van ermengem 1896]]
[[Category: Bontoxilysin]]
[[Category: Bontoxilysin]]
 +
[[Category: Large Structures]]
[[Category: Berntsson, R P.A]]
[[Category: Berntsson, R P.A]]
[[Category: Stenmark, P]]
[[Category: Stenmark, P]]

Revision as of 12:15, 23 September 2020

Binding domain of BoNT/A complexed with ganglioside variant

PDB ID 5tpb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools