This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gkq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='3gkq' size='340' side='right' caption='[[3gkq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3gkq' size='340' side='right' caption='[[3gkq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3gkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingomonas_sp._ka1 Sphingomonas sp. ka1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GKQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3gkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Novk1 Novk1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GKQ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">carAaII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=164608 Sphingomonas sp. KA1])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">carAaII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=164608 NOVK1])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gkq OCA], [http://pdbe.org/3gkq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gkq RCSB], [http://www.ebi.ac.uk/pdbsum/3gkq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gkq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gkq OCA], [http://pdbe.org/3gkq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gkq RCSB], [http://www.ebi.ac.uk/pdbsum/3gkq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gkq ProSAT]</span></td></tr>
</table>
</table>
Line 12: Line 12:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gkq_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gkq_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Sphingomonas sp. ka1]]
+
[[Category: Novk1]]
[[Category: Nojiri, H]]
[[Category: Nojiri, H]]
[[Category: Umeda, T]]
[[Category: Umeda, T]]

Revision as of 05:37, 7 December 2018

Terminal oxygenase of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1

3gkq, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools