1rsn

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[[Image:1rsn.gif|left|200px]]
[[Image:1rsn.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1rsn |SIZE=350|CAPTION= <scene name='initialview01'>1rsn</scene>, resolution 2.0&Aring;
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The line below this paragraph, containing "STRUCTURE_1rsn", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=SGP:GUANOSINE-2&#39;,3&#39;-CYCLOPHOSPHOROTHIOATE'>SGP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_T(1) Ribonuclease T(1)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.3 3.1.27.3] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1rsn| PDB=1rsn | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rsn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rsn OCA], [http://www.ebi.ac.uk/pdbsum/1rsn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rsn RCSB]</span>
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}}
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'''RIBONUCLEASE (RNASE SA) (E.C.3.1.4.8) COMPLEXED WITH EXO-2',3'-CYCLOPHOSPHOROTHIOATE'''
'''RIBONUCLEASE (RNASE SA) (E.C.3.1.4.8) COMPLEXED WITH EXO-2',3'-CYCLOPHOSPHOROTHIOATE'''
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==Reference==
==Reference==
Complex of ribonuclease Sa with a cyclic nucleotide and a proposed model for the reaction intermediate., Sevcik J, Zegers I, Wyns L, Dauter Z, Wilson KS, Eur J Biochem. 1993 Aug 15;216(1):301-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8396032 8396032]
Complex of ribonuclease Sa with a cyclic nucleotide and a proposed model for the reaction intermediate., Sevcik J, Zegers I, Wyns L, Dauter Z, Wilson KS, Eur J Biochem. 1993 Aug 15;216(1):301-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8396032 8396032]
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[[Category: Ribonuclease T(1)]]
 
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Streptomyces aureofaciens]]
[[Category: Streptomyces aureofaciens]]
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[[Category: Sevcik, J.]]
[[Category: Sevcik, J.]]
[[Category: Wilson, K S.]]
[[Category: Wilson, K S.]]
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[[Category: hydrolase (guanyloribonuclease)]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:51:39 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:32:22 2008''
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Revision as of 04:51, 3 May 2008

Template:STRUCTURE 1rsn

RIBONUCLEASE (RNASE SA) (E.C.3.1.4.8) COMPLEXED WITH EXO-2',3'-CYCLOPHOSPHOROTHIOATE


Overview

The structure of the complex of ribonuclease from Streptomyces aureofaciens (RNase Sa) with exo guanosine 2',3'-cyclophosphorothioate has been refined against 0.2-nm resolution synchrotron data using, as a starting model, coordinates from the RNase Sa: 2'-GMP complex. The refinement was based on all data over 1.0-0.2 nm and converged to a crystallographic R factor of 11.9%. This is the first structure of a microbial ribonuclease complexed with a 2',3'-cyclophosphorothioate, which is a thio analogue of the intermediate of the two-step reaction. However, exo guanosine 2',3'-cyclophosphorothioate is bound in a non-functional mode and is not hydrolysed. This structure therefore does not provide direct evidence on the identity of the amino acid residues responsible for catalytic cleavage of the substrate. However, based on present and previous results, a plausible model is proposed for the complex of the cyclic intermediate which acts as substrate for the second step of the catalysis.

About this Structure

1RSN is a Single protein structure of sequence from Streptomyces aureofaciens. Full crystallographic information is available from OCA.

Reference

Complex of ribonuclease Sa with a cyclic nucleotide and a proposed model for the reaction intermediate., Sevcik J, Zegers I, Wyns L, Dauter Z, Wilson KS, Eur J Biochem. 1993 Aug 15;216(1):301-5. PMID:8396032 Page seeded by OCA on Sat May 3 07:51:39 2008

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