This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5kdj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==ZmpB metallopeptidase from Clostridium perfringens==
==ZmpB metallopeptidase from Clostridium perfringens==
-
<StructureSection load='5kdj' size='340' side='right' caption='[[5kdj]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='5kdj' size='340' side='right'caption='[[5kdj]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5kdj]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KDJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KDJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5kdj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clop1 Clop1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KDJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5KDJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kd2|5kd2]], [[5kd5|5kd5]], [[5kd8|5kd8]], [[5kdn|5kdn]], [[5kds|5kds]], [[5kdu|5kdu]], [[5kdv|5kdv]], [[5kdw|5kdw]], [[5kdx|5kdx]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kd2|5kd2]], [[5kd5|5kd5]], [[5kd8|5kd8]], [[5kdn|5kdn]], [[5kds|5kds]], [[5kdu|5kdu]], [[5kdv|5kdv]], [[5kdw|5kdw]], [[5kdx|5kdx]]</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kdj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kdj OCA], [http://pdbe.org/5kdj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kdj RCSB], [http://www.ebi.ac.uk/pdbsum/5kdj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kdj ProSAT]</span></td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CPF_1489 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=195103 CLOP1])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5kdj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kdj OCA], [http://pdbe.org/5kdj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kdj RCSB], [http://www.ebi.ac.uk/pdbsum/5kdj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kdj ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Clop1]]
 +
[[Category: Large Structures]]
[[Category: Boraston, A B]]
[[Category: Boraston, A B]]
[[Category: Ficko-Blean, E]]
[[Category: Ficko-Blean, E]]

Revision as of 15:23, 8 July 2020

ZmpB metallopeptidase from Clostridium perfringens

PDB ID 5kdj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools