We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

Sandbox Reserved 1302

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(Interactions)
Line 4: Line 4:
<Structure load='1zaa' size='350' frame='true' align='right' caption='Here is a view of the 1zaa structure' scene='Insert optional scene name here' />
<Structure load='1zaa' size='350' frame='true' align='right' caption='Here is a view of the 1zaa structure' scene='Insert optional scene name here' />
-
The “finger” refers to the secondary structures (α-helix and β-sheet) that are held together by the <scene name='75/751195/Sandbox_zinc/1'>Zn ion</scene>.
+
The “finger” refers to the secondary structures (α-helix and β-sheet) that are held together by the <scene name='75/751195/Sandbox_zinc/2'>Zinc ion</scene>.
==Function==
==Function==
Line 12: Line 12:
==Interactions==
==Interactions==
-
The zinc-fingers usually interact with the outside of B-DNA. When interacting with DNA, the zinc fingers bind in the major groove of B-DNA and wrap part way around the double helix. The amino acids at the top of the zinc-finger's alpha helix are typically used for recognition.
+
The zinc-fingers usually interact with the outside of B-DNA. When interacting with DNA, the zinc fingers bind in the major groove of B-DNA and wrap part way around the double helix.
==References==
==References==
Zinc Fingers. (n.d.). Retrieved February 08, 2017, from http://www.ebi.ac.uk/interpro/potm/2007_3/Page2.htm
Zinc Fingers. (n.d.). Retrieved February 08, 2017, from http://www.ebi.ac.uk/interpro/potm/2007_3/Page2.htm

Revision as of 20:50, 8 February 2017

Contents

Zinc-finger 1

Here is a view of the 1zaa structure

Drag the structure with the mouse to rotate

The “finger” refers to the secondary structures (α-helix and β-sheet) that are held together by the .

Function

This small protein motif is a transcriptional regulator. It recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation. regulate eukaryotic gene expression


Interactions

The zinc-fingers usually interact with the outside of B-DNA. When interacting with DNA, the zinc fingers bind in the major groove of B-DNA and wrap part way around the double helix.

References

Zinc Fingers. (n.d.). Retrieved February 08, 2017, from http://www.ebi.ac.uk/interpro/potm/2007_3/Page2.htm

Personal tools