5mxx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5mxx is ON HOLD
+
==Crystal structure of human SR protein kinase 1 (SRPK1) in complex with compound 1==
 +
<StructureSection load='5mxx' size='340' side='right' caption='[[5mxx]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5mxx]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MXX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MXX FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=W4A:5-METHYL-~{N}-[2-(4-METHYLPIPERAZIN-1-YL)-5-(TRIFLUOROMETHYL)PHENYL]FURAN-2-CARBOXAMIDE'>W4A</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mxx OCA], [http://pdbe.org/5mxx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mxx RCSB], [http://www.ebi.ac.uk/pdbsum/5mxx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mxx ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Serine/arginine-protein kinase 1 (SRPK1) regulates alternative splicing of VEGF-A to pro-angiogenic isoforms and SRPK1 inhibition can restore the balance of pro/antiangiogenic isoforms to normal physiological levels. The lack of potency and selectivity of available compounds has limited development of SRPK1 inhibitors, with the control of alternative splicing by splicing factor-specific kinases yet to be translated. We present here compounds that occupy a binding pocket created by the unique helical insert of SRPK1, and trigger a backbone flip in the hinge region, that results in potent (&lt;10 nM) and selective inhibition of SRPK1 kinase activity. Treatment with these inhibitors inhibited SRPK1 activity and phosphorylation of serine/arginine splicing factor 1 (SRSF1), resulting in alternative splicing of VEGF-A from pro-angiogenic to antiangiogenic isoforms. This property resulted in potent inhibition of blood vessel growth in models of choroidal angiogenesis in vivo. This work identifies tool compounds for splice isoform selective targeting of pro-angiogenic VEGF, which may lead to new therapeutic strategies for a diversity of diseases where dysfunctional splicing drives disease development.
-
Authors: Tallant, C., Redondo, C., Batson, J., Toop, H.D., Babaebi-Jadidib, R., Savitsky, P., Elkins, J.M., Newman, J.A., Burgess-Brown, N., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bates, D.O., Morris, J.C., Knapp, S., Structural Genomics Consortium (SGC)
+
Development of Potent, Selective SRPK1 Inhibitors as Potential Topical Therapeutics for Neovascular Eye Disease.,Batson J, Toop HD, Redondo C, Babaei-Jadidi R, Chaikuad A, Wearmouth SF, Gibbons B, Allen C, Tallant C, Zhang J, Du C, Hancox JC, Hawtrey T, Da Rocha J, Griffith R, Knapp S, Bates DO, Morris JC ACS Chem Biol. 2017 Mar 17;12(3):825-832. doi: 10.1021/acschembio.6b01048. Epub, 2017 Feb 6. PMID:28135068<ref>PMID:28135068</ref>
-
Description: Crystal structure of human SR protein kinase 1 (SRPK1) in complex with compound 1
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Elkins, J.M]]
+
<div class="pdbe-citations 5mxx" style="background-color:#fffaf0;"></div>
-
[[Category: Toop, H.D]]
+
== References ==
-
[[Category: Arrowsmith, C.H]]
+
<references/>
-
[[Category: Burgess-Brown, N]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Arrowsmith, C H]]
[[Category: Babaebi-Jadidib, R]]
[[Category: Babaebi-Jadidib, R]]
-
[[Category: Morris, J.C]]
+
[[Category: Bates, D O]]
[[Category: Batson, J]]
[[Category: Batson, J]]
-
[[Category: Von Delft, F]]
+
[[Category: Bountra, C]]
 +
[[Category: Burgess-Brown, N]]
 +
[[Category: Delft, F von]]
 +
[[Category: Edwards, A M]]
 +
[[Category: Elkins, J M]]
[[Category: Knapp, S]]
[[Category: Knapp, S]]
-
[[Category: Edwards, A.M]]
+
[[Category: Morris, J C]]
-
[[Category: Newman, J.A]]
+
[[Category: Newman, J A]]
-
[[Category: Structural Genomics Consortium (Sgc)]]
+
-
[[Category: Tallant, C]]
+
-
[[Category: Bates, D.O]]
+
[[Category: Redondo, C]]
[[Category: Redondo, C]]
-
[[Category: Bountra, C]]
+
[[Category: Structural genomic]]
[[Category: Savitsky, P]]
[[Category: Savitsky, P]]
 +
[[Category: Tallant, C]]
 +
[[Category: Toop, H D]]
 +
[[Category: Phosphorylation]]
 +
[[Category: Sgc]]
 +
[[Category: Splicing]]

Revision as of 13:39, 24 May 2017

Crystal structure of human SR protein kinase 1 (SRPK1) in complex with compound 1

5mxx, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools