5tcj

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'''Unreleased structure'''
 
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The entry 5tcj is ON HOLD until Paper Publication
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==Crystal structure of tryptophan synthase from M. tuberculosis - aminoacrylate and BRD4592-bound form==
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<StructureSection load='5tcj' size='340' side='right' caption='[[5tcj]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5tcj]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TCJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TCJ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=79V:(2R,3S,4R)-3-(2-fluoro[1,1-biphenyl]-4-yl)-4-(hydroxymethyl)azetidine-2-carbonitrile'>79V</scene>, <scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=P1T:2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC+ACID'>P1T</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5tcf|5tcf]], [[5tcg|5tcg]], [[5tch|5tch]], [[5tci|5tci]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tryptophan_synthase Tryptophan synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.20 4.2.1.20] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tcj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tcj OCA], [http://pdbe.org/5tcj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tcj RCSB], [http://www.ebi.ac.uk/pdbsum/5tcj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tcj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/TRPA_MYCTU TRPA_MYCTU]] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. [[http://www.uniprot.org/uniprot/TRPB_MYCTU TRPB_MYCTU]] The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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New antibiotics with novel targets are greatly needed. Bacteria have numerous essential functions, but only a small fraction of such processes-primarily those involved in macromolecular synthesis-are inhibited by current drugs. Targeting metabolic enzymes has been the focus of recent interest, but effective inhibitors have been difficult to identify. We describe a synthetic azetidine derivative, BRD4592, that kills Mycobacterium tuberculosis (Mtb) through allosteric inhibition of tryptophan synthase (TrpAB), a previously untargeted, highly allosterically regulated enzyme. BRD4592 binds at the TrpAB alpha-beta-subunit interface and affects multiple steps in the enzyme's overall reaction, resulting in inhibition not easily overcome by changes in metabolic environment. We show that TrpAB is required for the survival of Mtb and Mycobacterium marinum in vivo and that this requirement may be independent of an adaptive immune response. This work highlights the effectiveness of allosteric inhibition for targeting proteins that are naturally highly dynamic and that are essential in vivo, despite their apparent dispensability under in vitro conditions, and suggests a framework for the discovery of a next generation of allosteric inhibitors.
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Authors: Michalska, K., Maltseva, N.I., Jedrzejczak, R., Wellington, S., Nag, P.P., Fisher, S.L., Schreiber, S.L., Hung, D.T., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
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A small-molecule allosteric inhibitor of Mycobacterium tuberculosis tryptophan synthase.,Wellington S, Nag PP, Michalska K, Johnston SE, Jedrzejczak RP, Kaushik VK, Clatworthy AE, Siddiqi N, McCarren P, Bajrami B, Maltseva NI, Combs S, Fisher SL, Joachimiak A, Schreiber SL, Hung DT Nat Chem Biol. 2017 Sep;13(9):943-950. doi: 10.1038/nchembio.2420. Epub 2017 Jul , 3. PMID:28671682<ref>PMID:28671682</ref>
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Description: Crystal structure of tryptophan synthase from M. tuberculosis -aminoacrylate and BRD4592-bound form
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Michalska, K]]
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<div class="pdbe-citations 5tcj" style="background-color:#fffaf0;"></div>
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[[Category: Fisher, S.L]]
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== References ==
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[[Category: Joachimiak, A]]
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<references/>
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[[Category: Maltseva, N.I]]
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__TOC__
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[[Category: Hung, D.T]]
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</StructureSection>
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[[Category: Tryptophan synthase]]
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[[Category: Structural genomic]]
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[[Category: Fisher, S L]]
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[[Category: Hung, D T]]
[[Category: Jedrzejczak, R]]
[[Category: Jedrzejczak, R]]
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[[Category: Schreiber, S.L]]
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[[Category: Joachimiak, A]]
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[[Category: Center For Structural Genomics Of Infectious Diseases (Csgid)]]
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[[Category: Maltseva, N]]
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[[Category: Nag, P.P]]
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[[Category: Michalska, K]]
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[[Category: Nag, P P]]
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[[Category: Schreiber, S L]]
[[Category: Wellington, S]]
[[Category: Wellington, S]]
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[[Category: Allostery]]
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[[Category: Amino acid biosynthesis]]
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[[Category: Csgid]]
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[[Category: Heterotetramer]]
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[[Category: Lyase]]
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[[Category: Plp]]
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[[Category: Substrate channeling]]

Revision as of 04:17, 30 August 2017

Crystal structure of tryptophan synthase from M. tuberculosis - aminoacrylate and BRD4592-bound form

5tcj, resolution 2.40Å

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