5xdi
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Vaccatide: Antifungal Glutamine-rich 8C-Hevein-like Peptide, vH1== | |
+ | <StructureSection load='5xdi' size='340' side='right' caption='[[5xdi]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5xdi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vaccaria_hispanica Vaccaria hispanica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XDI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5XDI FirstGlance]. <br> | ||
+ | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5xdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xdi OCA], [http://pdbe.org/5xdi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xdi RCSB], [http://www.ebi.ac.uk/pdbsum/5xdi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xdi ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Hevein and hevein-like peptides are disulfide-constrained chitin-binding cysteine-rich peptides. They are divided into three subfamilies, 6C-, 8C-, and 10C-hevein-like peptides, based on the number of cysteine residues. In addition, hevein-like peptides can exist in two forms, short and long. The long C-terminal form found in hevein and 10C-hevein-like peptides contain a C-terminal protein cargo. In contrast, the short form without a protein cargo is found in all three subfamilies. Here, we report the discovery and characterization of two novel glutamine-rich and protein cargo-free 8C-hevein-like peptides, vaccatides vH1 and vH2, from Vaccaria hispanica of the Caryophyllaceae family. Proteomic analyses showed that the vaccatides are 40-41 amino acids in length and contain a chitin-binding domain. NMR determination revealed that vaccatide vH2 displays a highly compact structure with a N-terminal cystine knot and an addition C-terminal disulfide bond. Stability studies showed that this compact structure renders vaccatide vH2 resistant to thermal, chemical and proteolytic degradation. The chitin-binding vH2 was shown to inhibit the mycelium growth of four phyto-pathogenic fungal strains with IC50 values in the micromolar range. Our findings show that vaccatides represent a new family of 8C-hevein-like peptides, which are protein cargo-free and glutamine-rich, characteristics that differentiate them from the prototypic hevein and the 10C-hevein-like peptides. In summary, this study enriches the existing library of hevein-like peptides and provides insight into their molecular diversity in sequence, structure and biosynthesis. Additionally, their highly disulfide-constrained structure could be used as a scaffold for developing metabolically and orally active peptidyl therapeutics. | ||
- | + | Vaccatides: Antifungal Glutamine-Rich Hevein-Like Peptides from Vaccaria hispanica.,Wong KH, Tan WL, Kini SG, Xiao T, Serra A, Sze SK, Tam JP Front Plant Sci. 2017 Jun 21;8:1100. doi: 10.3389/fpls.2017.01100. eCollection, 2017. PMID:28680440<ref>PMID:28680440</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 5xdi" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Vaccaria hispanica]] | ||
+ | [[Category: Tam, J P]] | ||
[[Category: Xiao, T]] | [[Category: Xiao, T]] | ||
- | [[Category: | + | [[Category: Antifungal]] |
+ | [[Category: Antifungal protein]] | ||
+ | [[Category: Cystein]] | ||
+ | [[Category: Hevein-like peptide]] |
Revision as of 16:23, 20 October 2017
Vaccatide: Antifungal Glutamine-rich 8C-Hevein-like Peptide, vH1
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