This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5auo
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of the HypAB-Ni complex (AMPPCP)== | ==Crystal structure of the HypAB-Ni complex (AMPPCP)== | ||
| - | <StructureSection load='5auo' size='340' side='right' caption='[[5auo]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='5auo' size='340' side='right'caption='[[5auo]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5auo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AUO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AUO FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5auo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AUO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AUO FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a43|3a43]], [[3vx3|3vx3]], [[5aun|5aun]], [[5aup|5aup]], [[5auq|5auq]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a43|3a43]], [[3vx3|3vx3]], [[5aun|5aun]], [[5aup|5aup]], [[5auq|5auq]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hypA, TK2008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)]), TK2007 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5auo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5auo OCA], [http://pdbe.org/5auo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5auo RCSB], [http://www.ebi.ac.uk/pdbsum/5auo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5auo ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5auo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5auo OCA], [http://pdbe.org/5auo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5auo RCSB], [http://www.ebi.ac.uk/pdbsum/5auo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5auo ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| Line 23: | Line 24: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Kawashima, T]] | [[Category: Kawashima, T]] | ||
[[Category: Miki, K]] | [[Category: Miki, K]] | ||
[[Category: Nishitani, Y]] | [[Category: Nishitani, Y]] | ||
[[Category: Watanabe, S]] | [[Category: Watanabe, S]] | ||
| + | [[Category: Metal binding protein-hydrolase complex]] | ||
[[Category: Metallochaperone]] | [[Category: Metallochaperone]] | ||
[[Category: Protein complex]] | [[Category: Protein complex]] | ||
Revision as of 07:35, 3 July 2019
Crystal structure of the HypAB-Ni complex (AMPPCP)
| |||||||||||
