This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5aup

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of the HypAB complex==
==Crystal structure of the HypAB complex==
-
<StructureSection load='5aup' size='340' side='right' caption='[[5aup]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
+
<StructureSection load='5aup' size='340' side='right'caption='[[5aup]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5aup]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AUP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AUP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5aup]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AUP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AUP FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a43|3a43]], [[3vx3|3vx3]], [[5aun|5aun]], [[5auo|5auo]], [[5auq|5auq]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a43|3a43]], [[3vx3|3vx3]], [[5aun|5aun]], [[5auo|5auo]], [[5auq|5auq]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hypA, TK2008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)]), TK2007 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5aup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aup OCA], [http://pdbe.org/5aup PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5aup RCSB], [http://www.ebi.ac.uk/pdbsum/5aup PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5aup ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5aup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aup OCA], [http://pdbe.org/5aup PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5aup RCSB], [http://www.ebi.ac.uk/pdbsum/5aup PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5aup ProSAT]</span></td></tr>
</table>
</table>
Line 23: Line 24:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Kawashima, T]]
[[Category: Kawashima, T]]
[[Category: Miki, K]]
[[Category: Miki, K]]
[[Category: Nishitani, Y]]
[[Category: Nishitani, Y]]
[[Category: Watanabe, S]]
[[Category: Watanabe, S]]
 +
[[Category: Metal binding protein-hydrolase complex]]
[[Category: Metallochaperone]]
[[Category: Metallochaperone]]
[[Category: Protein complex]]
[[Category: Protein complex]]

Revision as of 07:42, 3 July 2019

Crystal structure of the HypAB complex

PDB ID 5aup

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools