This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1us5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1us5.jpg|left|200px]]
[[Image:1us5.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1us5 |SIZE=350|CAPTION= <scene name='initialview01'>1us5</scene>, resolution 1.50&Aring;
+
The line below this paragraph, containing "STRUCTURE_1us5", creates the "Structure Box" on the page.
-
|SITE= <scene name='pdbsite=AC1:GLU+Binding+Site+For+Chain+A'>AC1</scene>
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLU:GLUTAMIC+ACID'>GLU</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1us5| PDB=1us5 | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1us5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1us5 OCA], [http://www.ebi.ac.uk/pdbsum/1us5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1us5 RCSB]</span>
+
-
}}
+
'''PUTATIVE GLUR0 LIGAND BINDING CORE WITH L-GLUTAMATE'''
'''PUTATIVE GLUR0 LIGAND BINDING CORE WITH L-GLUTAMATE'''
Line 28: Line 25:
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Tahirov, T H.]]
[[Category: Tahirov, T H.]]
-
[[Category: glur0]]
+
[[Category: Glur0]]
-
[[Category: glutamate receptor]]
+
[[Category: Glutamate receptor]]
-
[[Category: l-glutamate]]
+
[[Category: L-glutamate]]
-
[[Category: membrane protein]]
+
[[Category: Membrane protein]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Riken structural genomics/proteomics initiative]]
-
[[Category: rsgi]]
+
[[Category: Rsgi]]
-
[[Category: structural genomic]]
+
[[Category: Structural genomic]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 11:36:59 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:14:28 2008''
+

Revision as of 08:37, 3 May 2008

Template:STRUCTURE 1us5

PUTATIVE GLUR0 LIGAND BINDING CORE WITH L-GLUTAMATE


Overview

As part of a structural genomics project, the crystal structure of a 314-amino-acid protein encoded by Thermus thermophilus HB8 gene TT1099 was solved to 1.75 A using the multiple-wavelength anomalous dispersion (MAD) method and a selenomethionine-incorporated protein. The native protein structure was solved to 1.5 A using the molecular-replacement method. Both structures revealed a bound ligand, L-glutamate or L-glutamine, and a fold related to the periplasmic substrate-binding proteins (PSBP). Further comparative structural analysis with other PSBP-fold proteins revealed the conservation of the predicted membrane permease binding surface area and indicated that the T. thermophilus HB8 molecule is most likely to be an L-glutamate and/or an L-glutamine-binding protein related to the cluster 3 periplasmic receptors. However, the geometry of ligand binding is unique to the T. thermophilus HB8 molecule.

About this Structure

1US5 is a Single protein structure of sequence from Thermus thermophilus. Full crystallographic information is available from OCA.

Reference

Structure of the Thermus thermophilus putative periplasmic glutamate/glutamine-binding protein., Takahashi H, Inagaki E, Kuroishi C, Tahirov TH, Acta Crystallogr D Biol Crystallogr. 2004 Oct;60(Pt 10):1846-54. Epub 2004, Sep 23. PMID:15388932 Page seeded by OCA on Sat May 3 11:36:59 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools