Sandbox Reserved 1242

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 2: Line 2:
==Syntaxin-Binding Protein 1 Structure==
==Syntaxin-Binding Protein 1 Structure==
<StructureSection load='4JEU' size='340' side='right' caption='STXBP1 in Rattus Norvegicus' scene=''>
<StructureSection load='4JEU' size='340' side='right' caption='STXBP1 in Rattus Norvegicus' scene=''>
-
Syntaxin-Binding Protein 1 (STXBP1), encoded by a gene of the same name, is a protein considered part of the Sec1/Munc18 family of proteins. In the picture on the right, there are actually two chains, A and B. These chains represent two sequence-unique entities. Chain A (pictured in grey), which is the STXBP1 strand, consists of 590 amino acid residues. Of these, 248 residues make up 26 alpha helices while 80 residues make up 23 strands of beta sheet. This peptide chain is in the L conformation meaning it is a mirror image of the D conformation while maintaining the same sequence. Chain B (pictured in green) is actually syntaxin A1 already bound to the STXBP1, and it contains 242 total residues. 170 residues make up 8 alpha helices here and one residue is responsible for one beta sheet. These two chains can be bound a in two different ways: to the N-terminus which is thought to cause interactions with SNARE proteins, and via a "closed" conformation which is thought to inhibit interactions.
+
Syntaxin-Binding Protein 1 (STXBP1), encoded by a gene of the same name, is a protein considered part of the Sec1/Munc18 family of proteins. In the picture on the right, there are actually two chains, A and B. These chains represent two sequence-unique entities. Chain A (pictured in grey), which is the STXBP1 strand, consists of 590 amino acid residues. Of these, 248 residues make up 26 alpha helices while 80 residues make up 23 strands of beta sheet. This peptide chain is in the L conformation meaning it is a mirror image of the D conformation while maintaining the same sequence. Chain B (pictured in green) is actually syntaxin A1 already bound to the STXBP1, and it contains 242 total residues. 170 residues make up 8 alpha helices here and one residue is responsible for one beta sheet. This peptide is also in the L conformation. These two chains can be bound in two different ways: to the N-terminus which is thought to cause interactions with SNARE proteins, and via a "closed" conformation which is thought to inhibit interactions.
== Function ==
== Function ==
-
STXBP1 is responsible for the regulation of membrane fusion through interactions with the family of SNARE proteins, syntaxin (a transmembrane attachment protein receptor). This is necessary for neurotransmission. The syntaxin assembles SNARE complexes which contain an open conformation of syntaxin A1. This complex and a closed formation of syntaxin A1 interact with STXBP1 causing and inhibiting interactions respectively. It is also said to participate in regulating synaptic vesicle docking and fusion. Likely, this is the result of GTP-binding involvement.
+
STXBP1 is responsible for the regulation of membrane fusion through interactions with the family of SNARE proteins, syntaxin (a transmembrane attachment protein receptor). This is necessary for neurotransmission. The syntaxin assembles SNARE complexes which contain an open conformation of syntaxin A1. This complex or a closed formation of syntaxin A1 interact with STXBP1 causing and inhibiting interactions respectively. It is also said to participate in regulating synaptic vesicle docking and fusion. Likely, this is the result of GTP-binding involvement.
== Disease ==
== Disease ==
-
The mutation of STXBP1 causing misfolding and cellular aggregation or the lack of the protein entirely is found to be responsible for early infantile epileptic encephalopathy (EIEE). Also called Ohtahara syndrome, this disease found is within the first 3 months of life and is characterized by poor suckling reflexes, hypotonia and seizures that can present alone or in clusters and last up to ten seconds. EIEE can lead to retardation, severe motor deficits, and even death. Researchers propose that this disease is caused by a haploinsufficiency due to the mutant STXBP1 gene drawing STXBP1 wild-type into aggregates and decreasing the level of function. Without gene function, the STXBP1 protein is either not made properly or not made at all.
+
A mutation of STXBP1 causing misfolding and cellular aggregation or the lack of the protein entirely is found to be responsible for early infantile epileptic encephalopathy (EIEE). Also called Ohtahara syndrome, this disease is found within the first 3 months of life and is characterized by poor suckling reflexes, hypotonia(floppy baby syndrome) and seizures that can present alone or in clusters and last up to ten seconds. EIEE can lead to retardation, severe motor deficits, and even death. Researchers propose that this disease is caused by a haploinsufficiency due to the mutant STXBP1 gene drawing STXBP1 wild-type into aggregates and decreasing the level of function. Without gene function, the STXBP1 protein is either not made properly or not made at all.
-
== Relevance ==
+
-
 
+
== References ==
== References ==
<references/>
<references/>
 +
<Hypotonia. (n.d.). Retrieved May 02, 2017, from https://medlineplus.gov/ency/article/003298.htm>

Revision as of 07:57, 8 May 2017

This Sandbox is Reserved from Jan 17 through June 31, 2017 for use in the course Biochemistry II taught by Jason Telford at the Maryville University, St. Louis, USA. This reservation includes Sandbox Reserved 1225 through Sandbox Reserved 1244.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Syntaxin-Binding Protein 1 Structure

STXBP1 in Rattus Norvegicus

Drag the structure with the mouse to rotate
Personal tools