5nuz

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m (Protected "5nuz" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 5nuz is ON HOLD until Paper Publication
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==Junin virus GP1 glycoprotein in complex with an antibody Fab fragment==
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<StructureSection load='5nuz' size='340' side='right' caption='[[5nuz]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5nuz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Junin Junin] and [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NUZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NUZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GPC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11619 JUNIN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nuz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nuz OCA], [http://pdbe.org/5nuz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nuz RCSB], [http://www.ebi.ac.uk/pdbsum/5nuz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nuz ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Transmission of hemorrhagic fever New World arenaviruses from their rodent reservoirs to human populations poses substantial public health and economic dangers. These zoonotic events are enabled by the specific interaction between the New World arenaviral attachment glycoprotein, GP1, and cell surface human transferrin receptor (hTfR1). Here, we present the structural basis for how a mouse-derived neutralizing antibody (nAb), OD01, disrupts this interaction by targeting the receptor-binding surface of the GP1 glycoprotein from Junin virus (JUNV), a hemorrhagic fever arenavirus endemic in central Argentina. Comparison of our structure with that of a previously reported nAb complex (JUNV GP1-GD01) reveals largely overlapping epitopes but highly distinct antibody-binding modes. Despite differences in GP1 recognition, we find that both antibodies present a key tyrosine residue, albeit on different chains, that inserts into a central pocket on JUNV GP1 and effectively mimics the contacts made by the host TfR1. These data provide a molecular-level description of how antibodies derived from different germline origins arrive at equivalent immunological solutions to virus neutralization.
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Authors: Zeltina, A., Krumm, S.A., Sahin, M., Struwe, W.B., Harlos, K., Nunberg, J.H., Crispin, M., Pinschewer, D.D., Doores, K.J., Bowden, T.A.
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Convergent immunological solutions to Argentine hemorrhagic fever virus neutralization.,Zeltina A, Krumm SA, Sahin M, Struwe WB, Harlos K, Nunberg JH, Crispin M, Pinschewer DD, Doores KJ, Bowden TA Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):7031-7036. doi:, 10.1073/pnas.1702127114. Epub 2017 Jun 19. PMID:28630325<ref>PMID:28630325</ref>
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Description: Junin virus GP1 glycoprotein in complex with an antibody Fab fragment
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Zeltina, A]]
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<div class="pdbe-citations 5nuz" style="background-color:#fffaf0;"></div>
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[[Category: Krumm, S.A]]
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== References ==
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[[Category: Nunberg, J.H]]
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<references/>
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[[Category: Doores, K.J]]
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__TOC__
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[[Category: Bowden, T.A]]
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</StructureSection>
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[[Category: Harlos, K]]
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[[Category: Junin]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Bowden, T A]]
[[Category: Crispin, M]]
[[Category: Crispin, M]]
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[[Category: Pinschewer, D.D]]
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[[Category: Doores, K J]]
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[[Category: Struwe, W.B]]
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[[Category: Harlos, K]]
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[[Category: Krumm, S A]]
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[[Category: Nunberg, J H]]
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[[Category: Pinschewer, D D]]
[[Category: Sahin, M]]
[[Category: Sahin, M]]
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[[Category: Struwe, W B]]
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[[Category: Zeltina, A]]
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[[Category: Immune system]]
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[[Category: Viral antigen-antibody complex]]

Revision as of 11:08, 6 November 2017

Junin virus GP1 glycoprotein in complex with an antibody Fab fragment

5nuz, resolution 1.85Å

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