This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5gjo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal strcuture of SrLDC mutant (A225C/T302C) in complex with PLP==
==Crystal strcuture of SrLDC mutant (A225C/T302C) in complex with PLP==
-
<StructureSection load='5gjo' size='340' side='right' caption='[[5gjo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='5gjo' size='340' side='right'caption='[[5gjo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5gjo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GJO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GJO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5gjo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"ancyromonas_ruminantium"_certes_1889 "ancyromonas ruminantium" certes 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GJO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5GJO FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5gjm|5gjm]], [[5gjn|5gjn]], [[5gjp|5gjp]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5gjm|5gjm]], [[5gjn|5gjn]], [[5gjp|5gjp]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ldc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=971 "Ancyromonas ruminantium" Certes 1889])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine_decarboxylase Lysine decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.18 4.1.1.18] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine_decarboxylase Lysine decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.18 4.1.1.18] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gjo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gjo OCA], [http://pdbe.org/5gjo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gjo RCSB], [http://www.ebi.ac.uk/pdbsum/5gjo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gjo ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5gjo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gjo OCA], [http://pdbe.org/5gjo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gjo RCSB], [http://www.ebi.ac.uk/pdbsum/5gjo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gjo ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5gjo" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5gjo" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ornithine decarboxylase|Ornithine decarboxylase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Ancyromonas ruminantium certes 1889]]
 +
[[Category: Large Structures]]
[[Category: Lysine decarboxylase]]
[[Category: Lysine decarboxylase]]
[[Category: Kim, K J]]
[[Category: Kim, K J]]

Revision as of 06:44, 13 May 2020

Crystal strcuture of SrLDC mutant (A225C/T302C) in complex with PLP

PDB ID 5gjo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5gjo"
Personal tools