This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5v3f
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Co-crystal structure of the fluorogenic RNA Mango== | ==Co-crystal structure of the fluorogenic RNA Mango== | ||
| - | <StructureSection load='5v3f' size='340' side='right' caption='[[5v3f]], [[Resolution|resolution]] 1.70Å' scene=''> | + | <StructureSection load='5v3f' size='340' side='right'caption='[[5v3f]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5v3f]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V3F OCA]. For a <b>guided tour on the structure components</b> use [http:// | + | <table><tr><td colspan='2'>[[5v3f]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V3F OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5V3F FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=74G:4-{[(2S)-3-{2,16-DIOXO-20-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]-6,9,12-TRIOXA-3,15-DIAZAICOSAN-1-YL}-2,3-DIHYDRO-1,3-BENZOTHIAZOL-2-YL]METHYL}-1-METHYLQUINOLIN-1-IUM'>74G</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=74G:4-{[(2S)-3-{2,16-DIOXO-20-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]-6,9,12-TRIOXA-3,15-DIAZAICOSAN-1-YL}-2,3-DIHYDRO-1,3-BENZOTHIAZOL-2-YL]METHYL}-1-METHYLQUINOLIN-1-IUM'>74G</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http:// | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5v3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v3f OCA], [http://pdbe.org/5v3f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v3f RCSB], [http://www.ebi.ac.uk/pdbsum/5v3f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v3f ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 20: | Line 20: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Amare, A R.Ferre-D]] | [[Category: Amare, A R.Ferre-D]] | ||
[[Category: Trachman, R J]] | [[Category: Trachman, R J]] | ||
[[Category: Quadruplex fluorescent rna]] | [[Category: Quadruplex fluorescent rna]] | ||
[[Category: Rna]] | [[Category: Rna]] | ||
Revision as of 08:29, 30 September 2020
Co-crystal structure of the fluorogenic RNA Mango
| |||||||||||
