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1ema
From Proteopedia
(Difference between revisions)
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==GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA== | ==GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA== | ||
| - | <StructureSection load='1ema' size='340' side='right' caption='[[1ema]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='1ema' size='340' side='right'caption='[[1ema]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1ema]] is a 1 chain structure. The June 2003 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Green Fluorescent Protein (GFP)'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2003_6 10.2210/rcsb_pdb/mom_2003_6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EMA OCA]. For a <b>guided tour on the structure components</b> use [http:// | + | <table><tr><td colspan='2'>[[1ema]] is a 1 chain structure. The June 2003 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Green Fluorescent Protein (GFP)'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2003_6 10.2210/rcsb_pdb/mom_2003_6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EMA OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1EMA FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http:// | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ema FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ema OCA], [http://pdbe.org/1ema PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ema RCSB], [http://www.ebi.ac.uk/pdbsum/1ema PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ema ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/1ema_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/1ema_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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*[[Gfp vc2|Gfp vc2]] | *[[Gfp vc2|Gfp vc2]] | ||
*[[Green Fluorescent Protein|Green Fluorescent Protein]] | *[[Green Fluorescent Protein|Green Fluorescent Protein]] | ||
| + | *[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]] | ||
*[[Green Fluorescent Protein: Research Tool|Green Fluorescent Protein: Research Tool]] | *[[Green Fluorescent Protein: Research Tool|Green Fluorescent Protein: Research Tool]] | ||
| - | *[[Proteopedia.org/wiki/index.php/User:Joel L. Sussman/GFP Test Page|Proteopedia.org/wiki/index.php/User:Joel L. Sussman/GFP Test Page]] | ||
| - | *[[Proteopedia.org/wiki/workshop/GFP Background|Proteopedia.org/wiki/workshop/GFP Background]] | ||
*[[User:Joel L. Sussman/GFP Test Page|User:Joel L. Sussman/GFP Test Page]] | *[[User:Joel L. Sussman/GFP Test Page|User:Joel L. Sussman/GFP Test Page]] | ||
*[[User:Lynmarie K Thompson/2009Chem490|User:Lynmarie K Thompson/2009Chem490]] | *[[User:Lynmarie K Thompson/2009Chem490|User:Lynmarie K Thompson/2009Chem490]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
[[Category: Ormo, M]] | [[Category: Ormo, M]] | ||
Revision as of 06:52, 7 October 2020
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA
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