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1yem
From Proteopedia
(Difference between revisions)
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==Conserved hypothetical protein Pfu-838710-001 from Pyrococcus furiosus== | ==Conserved hypothetical protein Pfu-838710-001 from Pyrococcus furiosus== | ||
| - | <StructureSection load='1yem' size='340' side='right' caption='[[1yem]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='1yem' size='340' side='right'caption='[[1yem]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1yem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xkc 1xkc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEM OCA]. For a <b>guided tour on the structure components</b> use [http:// | + | <table><tr><td colspan='2'>[[1yem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xkc 1xkc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YEM FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> |
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF0863 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 ATCC 43587])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF0863 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 ATCC 43587])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http:// | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1yem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yem OCA], [http://pdbe.org/1yem PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yem RCSB], [http://www.ebi.ac.uk/pdbsum/1yem PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yem ProSAT], [http://www.topsan.org/Proteins/SECSG/1yem TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ye/1yem_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ye/1yem_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Atcc 43587]] | [[Category: Atcc 43587]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Adams, M W.W]] | [[Category: Adams, M W.W]] | ||
[[Category: Chang, J]] | [[Category: Chang, J]] | ||
Revision as of 08:44, 20 January 2021
Conserved hypothetical protein Pfu-838710-001 from Pyrococcus furiosus
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Categories: Atcc 43587 | Large Structures | Adams, M W.W | Chang, J | Chen, L | III, W B.Arendall | Jenney, F E | Lee, D | Lin, D | Liu, Z J | Ng, J D | Praissman, J L | Richardson, D C | Richardson, J S | Rose, J P | Structural genomic | Shah, A | Tempel, W | Wang, B C | Yang, H | Conserved hypothetical protein | Hyperthermophile | PSI, Protein structure initiative | Pyrococcus furiosus | Secsg | Unknown function
