3dew
From Proteopedia
(Difference between revisions)
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==The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.== | ==The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.== | ||
| - | <StructureSection load='3dew' size='340' side='right' caption='[[3dew]], [[Resolution|resolution]] 1.75Å' scene=''> | + | <StructureSection load='3dew' size='340' side='right'caption='[[3dew]], [[Resolution|resolution]] 1.75Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dew]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dew]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_51573 Atcc 51573]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DEW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DEW FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU0175 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU0175 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=35554 ATCC 51573])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dew FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dew OCA], [https://pdbe.org/3dew PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dew RCSB], [https://www.ebi.ac.uk/pdbsum/3dew PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dew ProSAT], [https://www.topsan.org/Proteins/MCSG/3dew TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/3dew_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/3dew_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Atcc 51573]] | [[Category: Atcc 51573]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Abdullah, J]] | [[Category: Abdullah, J]] | ||
[[Category: Bigelow, L]] | [[Category: Bigelow, L]] | ||
Revision as of 07:57, 9 February 2022
The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.
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Categories: Atcc 51573 | Large Structures | Abdullah, J | Bigelow, L | Cuff, M E | Joachimiak, A | Structural genomic | Dna-binding | Geobacter sulfurreducen | Mcsg | PSI, Protein structure initiative | Tetr | Transcription | Transcription regulation | Transcription regulator | Transcriptional regulator
