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6b57
From Proteopedia
(Difference between revisions)
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<StructureSection load='6b57' size='340' side='right' caption='[[6b57]], [[Resolution|resolution]] 1.93Å' scene=''> | <StructureSection load='6b57' size='340' side='right' caption='[[6b57]], [[Resolution|resolution]] 1.93Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6b57]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B57 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6B57 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6b57]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B57 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6B57 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6b57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b57 OCA], [http://pdbe.org/6b57 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6b57 RCSB], [http://www.ebi.ac.uk/pdbsum/6b57 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6b57 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6b57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b57 OCA], [http://pdbe.org/6b57 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6b57 RCSB], [http://www.ebi.ac.uk/pdbsum/6b57 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6b57 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The P-element-induced wimpy testis (PIWI)-interacting RNA (piRNA) pathway plays a central role in transposon silencing and genome protection in the animal germline. A family of Tudor domain proteins regulates the piRNA pathway through direct Tudor domain-PIWI interactions. Tudor domains are known to fulfill this function by binding to methylated PIWI proteins in an arginine methylation-dependent manner. Here, we report a mechanism of methylation-independent Tudor domain-PIWI interaction. Unlike most other Tudor domains, the extended Tudor domain of mammalian Tudor domain-containing protein 2 (TDRD2) preferentially recognizes an unmethylated arginine-rich sequence from PIWI-like protein 1 (PIWIL1). Structural studies reveal an unexpected Tudor domain-binding mode for the PIWIL1 sequence in which the interface of Tudor and staphylococcal nuclease domains is primarily responsible for PIWIL1 peptide recognition. Mutations disrupting the TDRD2-PIWIL1 interaction compromise piRNA maturation via 3'-end trimming in vitro. Our work presented here reveals the molecular divergence of the interactions between different Tudor domain proteins and PIWI proteins. | ||
| + | |||
| + | Structural basis for arginine methylation-independent recognition of PIWIL1 by TDRD2.,Zhang H, Liu K, Izumi N, Huang H, Ding D, Ni Z, Sidhu SS, Chen C, Tomari Y, Min J Proc Natl Acad Sci U S A. 2017 Nov 8. pii: 201711486. doi:, 10.1073/pnas.1711486114. PMID:29118143<ref>PMID:29118143</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6b57" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Human]] | ||
[[Category: Arrowsmith, C H]] | [[Category: Arrowsmith, C H]] | ||
[[Category: Bountra, C]] | [[Category: Bountra, C]] | ||
Revision as of 10:35, 22 November 2017
tudor in complex with ligand
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Categories: Human | Arrowsmith, C H | Bountra, C | Edwards, A M | Min, J | Structural genomic | Tempel, W | Zhang, H | Protein binding | Protein-binding | Sgc | Tudor domain
