This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3g8v
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==The rationally designed catalytically inactive mutant Mth0212(D151N)== | ==The rationally designed catalytically inactive mutant Mth0212(D151N)== | ||
| - | <StructureSection load='3g8v' size='340' side='right' caption='[[3g8v]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='3g8v' size='340' side='right'caption='[[3g8v]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3g8v]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3g8v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Metth Metth]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G8V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G8V FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3fzi|3fzi]], [[3g00|3g00]], [[3g0a|3g0a]], [[3g0r|3g0r]], [[3g1k|3g1k]], [[3g2c|3g2c]], [[3g2d|3g2d]], [[3g38|3g38]], [[3g3c|3g3c]], [[3g3y|3g3y]], [[3g4t|3g4t]], [[3g91|3g91]], [[3ga6|3ga6]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3fzi|3fzi]], [[3g00|3g00]], [[3g0a|3g0a]], [[3g0r|3g0r]], [[3g1k|3g1k]], [[3g2c|3g2c]], [[3g2d|3g2d]], [[3g38|3g38]], [[3g3c|3g3c]], [[3g3y|3g3y]], [[3g4t|3g4t]], [[3g91|3g91]], [[3ga6|3ga6]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mth0212, MTH212, MTH_212 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mth0212, MTH212, MTH_212 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=187420 METTH])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Exodeoxyribonuclease_III Exodeoxyribonuclease III], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.11.2 3.1.11.2] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g8v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g8v OCA], [https://pdbe.org/3g8v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g8v RCSB], [https://www.ebi.ac.uk/pdbsum/3g8v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g8v ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 14: | Line 14: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g8/3g8v_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g8/3g8v_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 29: | Line 29: | ||
</div> | </div> | ||
<div class="pdbe-citations 3g8v" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3g8v" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Exonuclease 3D structures|Exonuclease 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 34: | Line 37: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Exodeoxyribonuclease III]] | [[Category: Exodeoxyribonuclease III]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Metth]] | [[Category: Metth]] | ||
[[Category: Dickmanns, A]] | [[Category: Dickmanns, A]] | ||
Revision as of 07:58, 9 March 2022
The rationally designed catalytically inactive mutant Mth0212(D151N)
| |||||||||||

