This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3kii
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==AGAO 5-phenoxy-2,3-pentadienylamine complex== | ==AGAO 5-phenoxy-2,3-pentadienylamine complex== | ||
| - | <StructureSection load='3kii' size='340' side='right' caption='[[3kii]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3kii' size='340' side='right'caption='[[3kii]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3kii]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3kii]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KII OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KII FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=P2Q:2-HYDROXY-5-{[(1S,2E)-1-FORMYL-4-PHENOXYBUT-2-EN-1YL]AMINO}-L-TYROSINE'>P2Q</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=P2Q:2-HYDROXY-5-{[(1S,2E)-1-FORMYL-4-PHENOXYBUT-2-EN-1YL]AMINO}-L-TYROSINE'>P2Q</scene></td></tr> | ||
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kn4|3kn4]], [[1sih|1sih]], [[1sii|1sii]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3kn4|3kn4]], [[1sih|1sih]], [[1sii|1sii]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PAOX ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PAOX ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1665 "Achromobacter globiformis" (Conn 1928) Bergey et al. 1930])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kii OCA], [https://pdbe.org/3kii PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kii RCSB], [https://www.ebi.ac.uk/pdbsum/3kii PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kii ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Copper amine oxidase 3D structures|Copper amine oxidase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Primary-amine oxidase]] | [[Category: Primary-amine oxidase]] | ||
[[Category: Ernberg, K E]] | [[Category: Ernberg, K E]] | ||
Revision as of 13:35, 4 May 2022
AGAO 5-phenoxy-2,3-pentadienylamine complex
| |||||||||||
