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5dzv

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Current revision (22:08, 28 June 2023) (edit) (undo)
 
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==Protocadherin alpha 7 extracellular cadherin domains 1-5==
==Protocadherin alpha 7 extracellular cadherin domains 1-5==
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<StructureSection load='5dzv' size='340' side='right' caption='[[5dzv]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
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<StructureSection load='5dzv' size='340' side='right'caption='[[5dzv]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5dzv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DZV FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5dzv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DZV FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5dzw|5dzw]], [[5dzx|5dzx]], [[5dzy|5dzy]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Pcdha7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dzv OCA], [https://pdbe.org/5dzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dzv RCSB], [https://www.ebi.ac.uk/pdbsum/5dzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dzv ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dzv OCA], [http://pdbe.org/5dzv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dzv RCSB], [http://www.ebi.ac.uk/pdbsum/5dzv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dzv ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/Q91Y13_MOUSE Q91Y13_MOUSE]] Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.[SAAS:SAAS00348345]
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[https://www.uniprot.org/uniprot/PCDA7_MOUSE PCDA7_MOUSE] Calcium-dependent cell-adhesion protein involved in cells self-recognition and non-self discrimination (PubMed:27161523). Thereby, it is involved in the establishment and maintenance of specific neuronal connections in the brain (PubMed:27161523).<ref>PMID:27161523</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Lk3 transgenic mice]]
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[[Category: Large Structures]]
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[[Category: Bahna, F]]
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[[Category: Mus musculus]]
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[[Category: Goodman, K M]]
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[[Category: Bahna F]]
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[[Category: Honig, B]]
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[[Category: Goodman KM]]
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[[Category: Shapiro, L]]
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[[Category: Honig B]]
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[[Category: Cadherin]]
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[[Category: Shapiro L]]
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[[Category: Cell adhesion]]
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[[Category: Dimer]]
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[[Category: Extracellular]]
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Current revision

Protocadherin alpha 7 extracellular cadherin domains 1-5

PDB ID 5dzv

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