3lyd

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Current revision (10:09, 6 November 2024) (edit) (undo)
 
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==Crystal structure of Putative uncharacterized protein from Jonesia denitrificans==
==Crystal structure of Putative uncharacterized protein from Jonesia denitrificans==
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<StructureSection load='3lyd' size='340' side='right' caption='[[3lyd]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
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<StructureSection load='3lyd' size='340' side='right'caption='[[3lyd]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3lyd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Jondd Jondd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LYD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3lyd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Jonesia_denitrificans_DSM_20603 Jonesia denitrificans DSM 20603]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LYD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Jden_0139 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471856 JONDD])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyd OCA], [https://pdbe.org/3lyd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lyd RCSB], [https://www.ebi.ac.uk/pdbsum/3lyd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lyd ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyd OCA], [http://pdbe.org/3lyd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lyd RCSB], [http://www.ebi.ac.uk/pdbsum/3lyd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lyd ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/C7QYG7_JONDD C7QYG7_JONDD]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyd_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Jondd]]
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[[Category: Jonesia denitrificans DSM 20603]]
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[[Category: Bearden, J]]
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[[Category: Large Structures]]
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[[Category: Chang, C]]
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[[Category: Bearden J]]
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[[Category: Eisen, J]]
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[[Category: Chang C]]
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[[Category: Joachimiak, A]]
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[[Category: Eisen J]]
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[[Category: Kerfeld, C]]
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[[Category: Joachimiak A]]
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[[Category: Structural genomic]]
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[[Category: Kerfeld C]]
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[[Category: Volkart, L]]
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[[Category: Volkart L]]
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[[Category: Wu, D]]
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[[Category: Wu D]]
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[[Category: Geba]]
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[[Category: Genomic encyclopaedia of bacteria and archaea]]
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[[Category: Jonesia denitrifican]]
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[[Category: Mcsg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Unknown function]]
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Current revision

Crystal structure of Putative uncharacterized protein from Jonesia denitrificans

PDB ID 3lyd

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