This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ntu
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==RADA RECOMBINASE D302K MUTANT IN COMPLEX with AMP-PNP== | ==RADA RECOMBINASE D302K MUTANT IN COMPLEX with AMP-PNP== | ||
| - | <StructureSection load='3ntu' size='340' side='right' caption='[[3ntu]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3ntu' size='340' side='right'caption='[[3ntu]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ntu]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3ntu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_voltae_atcc_33273 Methanococcus voltae atcc 33273]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NTU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NTU FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1t4g|1t4g]], [[2i1q|2i1q]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1t4g|1t4g]], [[2i1q|2i1q]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RADA ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RADA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=523842 Methanococcus voltae ATCC 33273])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ntu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ntu OCA], [https://pdbe.org/3ntu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ntu RCSB], [https://www.ebi.ac.uk/pdbsum/3ntu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ntu ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/RADA_METVO RADA_METVO]] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 20: | Line 20: | ||
</div> | </div> | ||
<div class="pdbe-citations 3ntu" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3ntu" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Resolvase 3D structures|Resolvase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Methanococcus voltae atcc 33273]] | [[Category: Methanococcus voltae atcc 33273]] | ||
[[Category: Luo, Y]] | [[Category: Luo, Y]] | ||
Revision as of 07:09, 12 May 2022
RADA RECOMBINASE D302K MUTANT IN COMPLEX with AMP-PNP
| |||||||||||
Categories: Large Structures | Methanococcus voltae atcc 33273 | Luo, Y | Active conformation | Atp complex | Atpase | Dmc1 | Rad51 | Rada | Reca | Recombinase | Recombination
