This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5h6o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Porphobilinogen deaminase from Vibrio Cholerae==
==Porphobilinogen deaminase from Vibrio Cholerae==
-
<StructureSection load='5h6o' size='340' side='right' caption='[[5h6o]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='5h6o' size='340' side='right'caption='[[5h6o]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5h6o]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5H6O FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5h6o]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6O OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5H6O FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DPM:3-[5-{[3-(2-CARBOXYETHYL)-4-(CARBOXYMETHYL)-5-METHYL-1H-PYRROL-2-YL]METHYL}-4-(CARBOXYMETHYL)-1H-PYRROL-3-YL]PROPANOIC+ACID'>DPM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPM:3-[5-{[3-(2-CARBOXYETHYL)-4-(CARBOXYMETHYL)-5-METHYL-1H-PYRROL-2-YL]METHYL}-4-(CARBOXYMETHYL)-1H-PYRROL-3-YL]PROPANOIC+ACID'>DPM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxymethylbilane_synthase Hydroxymethylbilane synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.61 2.5.1.61] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxymethylbilane_synthase Hydroxymethylbilane synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.61 2.5.1.61] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5h6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6o OCA], [http://pdbe.org/5h6o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h6o RCSB], [http://www.ebi.ac.uk/pdbsum/5h6o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6o ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5h6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6o OCA], [http://pdbe.org/5h6o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h6o RCSB], [http://www.ebi.ac.uk/pdbsum/5h6o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6o ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/A0A0H6VB38_VIBCL A0A0H6VB38_VIBCL]] Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.[HAMAP-Rule:MF_00260][SAAS:SAAS00347445]
[[http://www.uniprot.org/uniprot/A0A0H6VB38_VIBCL A0A0H6VB38_VIBCL]] Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.[HAMAP-Rule:MF_00260][SAAS:SAAS00347445]
 +
 +
==See Also==
 +
*[[Porphobilinogen Deaminase|Porphobilinogen Deaminase]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Hydroxymethylbilane synthase]]
[[Category: Hydroxymethylbilane synthase]]
 +
[[Category: Large Structures]]
[[Category: Chen, M]]
[[Category: Chen, M]]
[[Category: Funamizu, T]]
[[Category: Funamizu, T]]

Revision as of 06:54, 20 May 2020

Porphobilinogen deaminase from Vibrio Cholerae

PDB ID 5h6o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools