This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5mii

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:44, 1 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of carboxyl esterase 2 (TmelEST2) from mycorrhizal fungus Tuber melanosporum==
==Crystal structure of carboxyl esterase 2 (TmelEST2) from mycorrhizal fungus Tuber melanosporum==
-
<StructureSection load='5mii' size='340' side='right' caption='[[5mii]], [[Resolution|resolution]] 2.37&Aring;' scene=''>
+
<StructureSection load='5mii' size='340' side='right'caption='[[5mii]], [[Resolution|resolution]] 2.37&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mii]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Perigord_black_truffle Perigord black truffle]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MII OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MII FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mii]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Tuber_melanosporum_Mel28 Tuber melanosporum Mel28]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MII OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MII FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEB:O-BENZYLSULFONYL-SERINE'>SEB</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.372&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSTUM_00003552001 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=656061 Perigord black truffle])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SEB:O-BENZYLSULFONYL-SERINE'>SEB</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mii OCA], [http://pdbe.org/5mii PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mii RCSB], [http://www.ebi.ac.uk/pdbsum/5mii PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mii ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mii OCA], [https://pdbe.org/5mii PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mii RCSB], [https://www.ebi.ac.uk/pdbsum/5mii PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mii ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D5GA36_TUBMM D5GA36_TUBMM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Perigord black truffle]]
+
[[Category: Large Structures]]
-
[[Category: Cavazzini, D]]
+
[[Category: Tuber melanosporum Mel28]]
-
[[Category: Ottonello, S]]
+
[[Category: Cavazzini D]]
-
[[Category: Vallese, F]]
+
[[Category: Ottonello S]]
-
[[Category: Zanotti, G]]
+
[[Category: Vallese F]]
-
[[Category: Hydrolase]]
+
[[Category: Zanotti G]]
-
[[Category: Lipase alpha/beta hydrolase fold archaebacterial-like enzymes pmsf]]
+

Current revision

Crystal structure of carboxyl esterase 2 (TmelEST2) from mycorrhizal fungus Tuber melanosporum

PDB ID 5mii

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools