This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5idk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of West Nile Virus NS2B-NS3 protease in complex with a capped dipeptide boronate inhibitor==
==Crystal structure of West Nile Virus NS2B-NS3 protease in complex with a capped dipeptide boronate inhibitor==
-
<StructureSection load='5idk' size='340' side='right' caption='[[5idk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='5idk' size='340' side='right'caption='[[5idk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5idk]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Wnv Wnv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IDK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IDK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5idk]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Wnv Wnv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IDK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5IDK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6A8:((R)-1-((S)-3-(4-(AMINOMETHYL)PHENYL)-2-BENZAMIDOPROPANEAMIDO)-4-GUANIDINOBUTYL)BORONIC+ACID,+CYCLIC+DOUBLE+ESTER+WITH+GLYCEROL'>6A8</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6A8:((R)-1-((S)-3-(4-(AMINOMETHYL)PHENYL)-2-BENZAMIDOPROPANEAMIDO)-4-GUANIDINOBUTYL)BORONIC+ACID,+CYCLIC+DOUBLE+ESTER+WITH+GLYCEROL'>6A8</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5idk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5idk OCA], [http://pdbe.org/5idk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5idk RCSB], [http://www.ebi.ac.uk/pdbsum/5idk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5idk ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5idk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5idk OCA], [http://pdbe.org/5idk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5idk RCSB], [http://www.ebi.ac.uk/pdbsum/5idk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5idk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 18: Line 18:
</div>
</div>
<div class="pdbe-citations 5idk" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5idk" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Virus proteases 3D strutures|Virus proteases 3D strutures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Wnv]]
[[Category: Wnv]]
[[Category: Hilgenfeld, R]]
[[Category: Hilgenfeld, R]]

Revision as of 07:13, 3 June 2020

Crystal structure of West Nile Virus NS2B-NS3 protease in complex with a capped dipeptide boronate inhibitor

PDB ID 5idk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5idk"
Personal tools