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5jrf

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Current revision (19:03, 20 September 2023) (edit) (undo)
 
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==Crystal structure of the light-driven sodium pump KR2 bound with iodide ions==
==Crystal structure of the light-driven sodium pump KR2 bound with iodide ions==
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<StructureSection load='5jrf' size='340' side='right' caption='[[5jrf]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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<StructureSection load='5jrf' size='340' side='right'caption='[[5jrf]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5jrf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cip_108743 Cip 108743]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JRF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JRF FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5jrf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dokdonia_eikasta Dokdonia eikasta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JRF FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=LFA:EICOSANE'>LFA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYR:N~6~-[(2Z,4E,6E,8E)-3,7-DIMETHYL-9-(2,6,6-TRIMETHYLCYCLOHEX-1-EN-1-YL)NONA-2,4,6,8-TETRAENYL]LYSINE'>LYR</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=LFA:EICOSANE'>LFA</scene>, <scene name='pdbligand=LYR:N~6~-[(2Z,4E,6E,8E)-3,7-DIMETHYL-9-(2,6,6-TRIMETHYLCYCLOHEX-1-EN-1-YL)NONA-2,4,6,8-TETRAENYL]LYSINE'>LYR</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4xtl|4xtl]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jrf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jrf OCA], [https://pdbe.org/5jrf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jrf RCSB], [https://www.ebi.ac.uk/pdbsum/5jrf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jrf ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NaR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=308116 CIP 108743])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jrf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jrf OCA], [http://pdbe.org/5jrf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jrf RCSB], [http://www.ebi.ac.uk/pdbsum/5jrf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jrf ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/N0DKS8_9FLAO N0DKS8_9FLAO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5jrf" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5jrf" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Rhodopsin 3D structures|Rhodopsin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Cip 108743]]
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[[Category: Dokdonia eikasta]]
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[[Category: Gordeliy, V]]
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[[Category: Large Structures]]
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[[Category: Gushchin, I]]
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[[Category: Gordeliy V]]
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[[Category: Kovalev, K]]
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[[Category: Gushchin I]]
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[[Category: Melnikov, I]]
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[[Category: Kovalev K]]
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[[Category: Polovinkin, V]]
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[[Category: Melnikov I]]
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[[Category: Popov, A]]
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[[Category: Polovinkin V]]
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[[Category: Shevchenko, V]]
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[[Category: Popov A]]
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[[Category: Iodide]]
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[[Category: Shevchenko V]]
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[[Category: Membrane protein]]
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[[Category: Sodium pump]]
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[[Category: Transport protein]]
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Current revision

Crystal structure of the light-driven sodium pump KR2 bound with iodide ions

PDB ID 5jrf

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