This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5d92

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum==
==Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum==
-
<StructureSection load='5d92' size='340' side='right' caption='[[5d92]], [[Resolution|resolution]] 3.62&Aring;' scene=''>
+
<StructureSection load='5d92' size='340' side='right'caption='[[5d92]], [[Resolution|resolution]] 3.62&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5d92]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfu Arcfu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D92 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D92 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5d92]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304] and [https://en.wikipedia.org/wiki/Renibacterium_salmoninarum_ATCC_33209 Renibacterium salmoninarum ATCC 33209]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D92 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5D92 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=58A:5-O-[(R)-{[(S)-{(2R)-2,3-BIS[(9E)-OCTADEC-9-ENOYLOXY]PROPOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]CYTIDINE'>58A</scene>, <scene name='pdbligand=8K6:OCTADECANE'>8K6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=58A:5-O-[(R)-{[(S)-{(2R)-2,3-BIS[(9E)-OCTADEC-9-ENOYLOXY]PROPOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]CYTIDINE'>58A</scene>, <scene name='pdbligand=8K6:OCTADECANE'>8K6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5d91|5d91]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5d92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d92 OCA], [https://pdbe.org/5d92 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5d92 RCSB], [https://www.ebi.ac.uk/pdbsum/5d92 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5d92 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RSal33209_2010 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224325 ARCFU])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d92 OCA], [http://pdbe.org/5d92 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5d92 RCSB], [http://www.ebi.ac.uk/pdbsum/5d92 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5d92 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O27985_ARCFU O27985_ARCFU] [https://www.uniprot.org/uniprot/A9WSF5_RENSM A9WSF5_RENSM] Catalyzes the conjugation of the 1'-hydroxyl group of D-myo-inositol-3-phosphate (also named L-myo-inositol-1-phosphate) with a lipid tail of cytidine diphosphate diacylglycerol (CDP-DAG), forming phosphatidylinositol phosphate (PIP) and CMP. PIP is a precursor of phosphatidylinositol (PI) which is an essential lipid required for cell wall formation.[HAMAP-Rule:MF_02241]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arcfu]]
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
[[Category: Banerjee, S]]
+
[[Category: Large Structures]]
-
[[Category: Clarke, O B]]
+
[[Category: Renibacterium salmoninarum ATCC 33209]]
-
[[Category: Dufrisne, M Belcher]]
+
[[Category: Banerjee S]]
-
[[Category: Hendrickson, W A]]
+
[[Category: Belcher Dufrisne M]]
-
[[Category: Jorge, C D]]
+
[[Category: Clarke OB]]
-
[[Category: Kim, M]]
+
[[Category: Hendrickson WA]]
-
[[Category: Mancia, F]]
+
[[Category: Jorge CD]]
-
[[Category: Rajashankar, K R]]
+
[[Category: Kim M]]
-
[[Category: Santos, H]]
+
[[Category: Mancia F]]
-
[[Category: Tomasek, D T]]
+
[[Category: Rajashankar KR]]
-
[[Category: Enzyme]]
+
[[Category: Santos H]]
-
[[Category: Lipid biosynthesis]]
+
[[Category: Tomasek DT]]
-
[[Category: Membrane protein]]
+
-
[[Category: Phosphatidylinositol]]
+

Revision as of 10:26, 21 June 2023

Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum

PDB ID 5d92

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5d92"
Personal tools