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| | ==Structure of the S. venezulae BldD DNA-binding domain== | | ==Structure of the S. venezulae BldD DNA-binding domain== |
| - | <StructureSection load='4ob4' size='340' side='right' caption='[[4ob4]], [[Resolution|resolution]] 2.80Å' scene=''> | + | <StructureSection load='4ob4' size='340' side='right'caption='[[4ob4]], [[Resolution|resolution]] 2.80Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4ob4]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Strco Strco]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OB4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OB4 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4ob4]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor_A3(2) Streptomyces coelicolor A3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OB4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OB4 FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ewt|2ewt]], [[4oax|4oax]], [[4oay|4oay]], [[4oaz|4oaz]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ob4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ob4 OCA], [https://pdbe.org/4ob4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ob4 RCSB], [https://www.ebi.ac.uk/pdbsum/4ob4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ob4 ProSAT]</span></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bldD, SAV_6861, SCO1489 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 STRCO])</td></tr>
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| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ob4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ob4 OCA], [http://pdbe.org/4ob4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ob4 RCSB], [http://www.ebi.ac.uk/pdbsum/4ob4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ob4 ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q7AKQ8_STRCO Q7AKQ8_STRCO] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Strco]] | + | [[Category: Large Structures]] |
| - | [[Category: Brennan, R]] | + | [[Category: Brennan R]] |
| - | [[Category: Buttner, M]] | + | [[Category: Buttner M]] |
| - | [[Category: Tschowri, N]] | + | [[Category: Tschowri N]] |
| - | [[Category: Schumacher, M A]] | + | [[Category: Schumacher MA]] |
| - | [[Category: Bldd dna binding domain]]
| + | |
| - | [[Category: Dna binding protein]]
| + | |
| - | [[Category: Helix turn helix]]
| + | |
| Structural highlights
Function
Q7AKQ8_STRCO
Publication Abstract from PubMed
The cyclic dinucleotide c-di-GMP is a signaling molecule with diverse functions in cellular physiology. Here, we report that c-di-GMP can assemble into a tetramer that mediates the effective dimerization of a transcription factor, BldD, which controls the progression of multicellular differentiation in sporulating actinomycete bacteria. BldD represses expression of sporulation genes during vegetative growth in a manner that depends on c-di-GMP-mediated dimerization. Structural and biochemical analyses show that tetrameric c-di-GMP links two subunits of BldD through their C-terminal domains, which are otherwise separated by ~10 A and thus cannot effect dimerization directly. Binding of the c-di-GMP tetramer by BldD is selective and requires a bipartite RXD-X8-RXXD signature. The findings indicate a unique mechanism of protein dimerization and the ability of nucleotide signaling molecules to assume alternative oligomeric states to effect different functions.
Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development.,Tschowri N, Schumacher MA, Schlimpert S, Chinnam NB, Findlay KC, Brennan RG, Buttner MJ Cell. 2014 Aug 28;158(5):1136-47. doi: 10.1016/j.cell.2014.07.022. PMID:25171413[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Tschowri N, Schumacher MA, Schlimpert S, Chinnam NB, Findlay KC, Brennan RG, Buttner MJ. Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development. Cell. 2014 Aug 28;158(5):1136-47. doi: 10.1016/j.cell.2014.07.022. PMID:25171413 doi:http://dx.doi.org/10.1016/j.cell.2014.07.022
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